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Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear
Exocarp color is a commercially essential quality for pear which can be divided into two types: green and russet. The occurrence of russet color is associated with deficiencies and defects in the cuticular and epidermal layers, which affect the structure of the cell wall and the deposition of suberi...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530978/ https://www.ncbi.nlm.nih.gov/pubmed/37761967 http://dx.doi.org/10.3390/genes14091827 |
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author | Zhang, Simeng Xu, Jiayu Zhang, Ying Cao, Yufen |
author_facet | Zhang, Simeng Xu, Jiayu Zhang, Ying Cao, Yufen |
author_sort | Zhang, Simeng |
collection | PubMed |
description | Exocarp color is a commercially essential quality for pear which can be divided into two types: green and russet. The occurrence of russet color is associated with deficiencies and defects in the cuticular and epidermal layers, which affect the structure of the cell wall and the deposition of suberin. Until now, the genetic basics triggering this trait have not been well understood, and limited genes have been identified for the trait. To figure out the gene controlling the trait of exocarp color, we perform a comprehensive genome-wide association study, and we describe the candidate genes. One gene encoding the ABCG protein has been verified to be associated with the trait, using an integrative analysis of the metabolomic and transcriptomic data. This review covers a variety of omics resources, which provide a valuable resource for identifying gene-controlled traits of interest. The findings in this study help to elucidate the genetic components responsible for the trait of exocarp color in pear, and the implications of these findings for future pear breeding are evaluated. |
format | Online Article Text |
id | pubmed-10530978 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-105309782023-09-28 Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear Zhang, Simeng Xu, Jiayu Zhang, Ying Cao, Yufen Genes (Basel) Article Exocarp color is a commercially essential quality for pear which can be divided into two types: green and russet. The occurrence of russet color is associated with deficiencies and defects in the cuticular and epidermal layers, which affect the structure of the cell wall and the deposition of suberin. Until now, the genetic basics triggering this trait have not been well understood, and limited genes have been identified for the trait. To figure out the gene controlling the trait of exocarp color, we perform a comprehensive genome-wide association study, and we describe the candidate genes. One gene encoding the ABCG protein has been verified to be associated with the trait, using an integrative analysis of the metabolomic and transcriptomic data. This review covers a variety of omics resources, which provide a valuable resource for identifying gene-controlled traits of interest. The findings in this study help to elucidate the genetic components responsible for the trait of exocarp color in pear, and the implications of these findings for future pear breeding are evaluated. MDPI 2023-09-21 /pmc/articles/PMC10530978/ /pubmed/37761967 http://dx.doi.org/10.3390/genes14091827 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Simeng Xu, Jiayu Zhang, Ying Cao, Yufen Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title | Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title_full | Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title_fullStr | Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title_full_unstemmed | Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title_short | Identification and Characterization of ABCG15—A Gene Required for Exocarp Color Differentiation in Pear |
title_sort | identification and characterization of abcg15—a gene required for exocarp color differentiation in pear |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10530978/ https://www.ncbi.nlm.nih.gov/pubmed/37761967 http://dx.doi.org/10.3390/genes14091827 |
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