Cargando…

Analysis of the Selection Signal of the Tibetan Black Chicken Genome Based on Whole-Genome Sequencing

Background: The Tibetan chicken has adapted well to high altitudes genetically after its long-term habitation in the plateau. In this study, we analyzed the selection signal of Tibetan black chickens (TBCs) and discovered genes associated with the characteristics of germplasm. Methods: Whole-genome...

Descripción completa

Detalles Bibliográficos
Autores principales:	Feng, Jing, Zhu, Wei, Shi, Hairen, Peng, Da, Zang, Lei, Wang, Yan, ZhaXi, Luobu, BaiMa, Jiancai, Amevor, Felix Kwame, Wang, Xiaoqi, Ma, Xueying, Zhao, Xiaoling
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10531317/ https://www.ncbi.nlm.nih.gov/pubmed/37761812 http://dx.doi.org/10.3390/genes14091672

Ejemplares similares

Validity and reliability of the Tibetan version of s-EMBU for measuring parenting styles
por: Yangzong, Ciren, et al.
Publicado: (2016)

Characterization of fungal microbial diversity in Tibetan sheep, Tibetan gazelle and Tibetan antelope in the Qiangtang region of Tibet
por: Shang, Zhenda, et al.
Publicado: (2022)

Genome methylation and regulatory functions for hypoxic adaptation in Tibetan chicken embryos
por: Zhang, Yawen, et al.
Publicado: (2017)

Whole genome bisulfite sequencing reveals unique adaptations to high-altitude environments in Tibetan chickens
por: Zhang, Zengrong, et al.
Publicado: (2018)

A New and Effective Method to Trace Tibetan Chicken by Amino Acid Profiling
por: Qie, Mengjie, et al.
Publicado: (2023)

High Expression of miR-204 in Chicken Atrophic Ovaries Promotes Granulosa Cell Apoptosis and Inhibits Autophagy
por: Cui, Zhifu, et al.
Publicado: (2020)

Identification of copy number variation in Tibetan sheep using whole genome resequencing reveals evidence of genomic selection
por: Shi, Huibin, et al.
Publicado: (2023)

CircSCAPER contributes to IL-1β-induced osteoarthritis in vitro via miR-140-3p/EZH2 axis
por: Luobu, Zhaxi, et al.
Publicado: (2022)

Altitude-adaption of gut microbiota in Tibetan chicken
por: Du, Xiaxia, et al.
Publicado: (2022)

Draft Genome Assembly for the Tibetan Black Bear (Ursus thibetanus thibetanus)
por: Zhu, Chenglong, et al.
Publicado: (2020)

Evolutionary history of Tibetans inferred from whole-genome sequencing
por: Hu, Hao, et al.
Publicado: (2017)

Whole genome sequencing revealed genetic diversity, population structure, and selective signature of Panou Tibetan sheep
por: Shi, Huibin, et al.
Publicado: (2023)

Genome-Wide Transcriptional Analysis Reveals the Protection against Hypoxia-Induced Oxidative Injury in the Intestine of Tibetans via the Inhibition of GRB2/EGFR/PTPN11 Pathways
por: Li, Kang, et al.
Publicado: (2016)

Integrated Proteomic and Metabolomic Analyses of Chicken Ovary Revealed the Crucial Role of Lipoprotein Lipase on Lipid Metabolism and Steroidogenesis During Sexual Maturity
por: Cui, Zhifu, et al.
Publicado: (2022)

Genome Resequencing Identifies Unique Adaptations of Tibetan Chickens to Hypoxia and High-Dose Ultraviolet Radiation in High-Altitude Environments
por: Zhang, Qian, et al.
Publicado: (2016)

Genetic diversity and selection of Tibetan sheep breeds revealed by whole-genome resequencing
por: Tian, Dehong, et al.
Publicado: (2023)

Complete mitochondrial genome and phylogenetic analysis of Huangshan Black chicken (Gallus gallus)
por: Jin, Sihua, et al.
Publicado: (2021)

Draft genome sequence of the Tibetan antelope
por: Ge, Ri-Li, et al.
Publicado: (2013)

Whole-Genome Sequencing Identifies the Egl Nine Homologue 3 (egln3/phd3) and Protein Phosphatase 1 Regulatory Inhibitor Subunit 2 (PPP1R2P1) Associated with High-Altitude Polycythemia in Tibetans at High Altitude
por: Gesang, Luobu, et al.
Publicado: (2019)

Whole genome and transcriptome maps of the entirely black native Korean chicken breed Yeonsan Ogye
por: Sohn, Jang-il, et al.
Publicado: (2018)

Responses of rumen microorganisms and metabolites to different roughage of domesticated Tibetan sheep
por: Ren, Yue, et al.
Publicado: (2023)

Genome-wide analysis of CNVs in three populations of Tibetan sheep using whole-genome resequencing
por: Hu, Linyong, et al.
Publicado: (2022)

Circadian miR-449c-5p regulates uterine Ca(2+) transport during eggshell calcification in chickens
por: Cui, Zhifu, et al.
Publicado: (2021)

Genetic evidence from mitochondrial DNA corroborates the origin of Tibetan chickens
por: Zhang, Long, et al.
Publicado: (2017)

MiR-34a-5p promotes autophagy and apoptosis of ovarian granulosa cells via the Hippo-YAP signaling pathway by targeting LEF1 in chicken
por: Han, Shunshuan, et al.
Publicado: (2022)

Genome-wide run of homozygosity analysis reveals candidate genomic regions associated with environmental adaptations of Tibetan native chickens
por: Yuan, Jingwei, et al.
Publicado: (2022)

Dietary quercetin and vitamin E supplementation modulates the reproductive performance and antioxidant capacity of aged male breeder chickens
por: Amevor, Felix Kwame, et al.
Publicado: (2022)

A Comparison of Genetic Diversity of COX-III Gene in Lowland Chickens and Tibetan Chickens
por: Liu, Xueqin, et al.
Publicado: (2017)

Whole-genome resequencing of Xishuangbanna fighting chicken to identify signatures of selection
por: Guo, Xing, et al.
Publicado: (2016)

Whole Genome Sequence of Alternaria alternata, the Causal Agent of Black Spot of Kiwifruit
por: Huang, Ke, et al.
Publicado: (2021)

Genetic structure and characteristics of Tibetan chickens
por: Li, Shijun, et al.
Publicado: (2023)

An improved high-quality genome assembly and annotation of Tibetan hulless barley
por: Zeng, Xingquan, et al.
Publicado: (2020)

Whole mitochondrial genome analysis in highland Tibetans: further matrilineal genetic structure exploration
por: Li, Xin, et al.
Publicado: (2023)

Health-related quality of life and its changes of the Tibetan population in China: based on the 2013 and 2018 National Health Services Surveys
por: Dou, Lei, et al.
Publicado: (2023)

Potential Implications of Citrulline and Quercetin on Gut Functioning of Monogastric Animals and Humans: A Comprehensive Review
por: Uyanga, Victoria Anthony, et al.
Publicado: (2021)

Whole-Genome Sequencing of Tibetan Macaque (Macaca thibetana) Provides New Insight into the Macaque Evolutionary History
por: Fan, Zhenxin, et al.
Publicado: (2014)

Insight into the differences of meat quality between Qinghai white Tibetan sheep and black Tibetan sheep from the perspective of metabolomics and rumen microbiota
por: Ma, Ying, et al.
Publicado: (2023)

The complete mitochondrial genome of Tibetan hulless barley
por: Wang, Yu lin, et al.
Publicado: (2016)

Whole-genome assembly of Ganoderma leucocontextum (Ganodermataceae, Fungi) discovered from the Tibetan Plateau of China
por: Liu, Yuanchao, et al.
Publicado: (2021)

Assessing Genomic Diversity and Selective Pressures in Bohai Black Cattle Using Whole-Genome Sequencing Data
por: Ma, Xiaohui, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_ld1sllknsj775afb44dss7jb96