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Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis

Ancistrus is a highly diverse neotropical fish genus that exhibits extensive chromosomal variability, encompassing karyotypic morphology, diploid chromosome number (2n = 34–54), and the evolution of various types of sex chromosome systems. Robertsonian rearrangements related to unstable chromosomal...

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Autores principales: Santos da Silva, Kevin, Glugoski, Larissa, Vicari, Marcelo Ricardo, de Souza, Augusto César Paes, Akama, Alberto, Pieczarka, Julio Cesar, Nagamachi, Cleusa Yoshiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10532334/
https://www.ncbi.nlm.nih.gov/pubmed/37762461
http://dx.doi.org/10.3390/ijms241814159
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author Santos da Silva, Kevin
Glugoski, Larissa
Vicari, Marcelo Ricardo
de Souza, Augusto César Paes
Akama, Alberto
Pieczarka, Julio Cesar
Nagamachi, Cleusa Yoshiko
author_facet Santos da Silva, Kevin
Glugoski, Larissa
Vicari, Marcelo Ricardo
de Souza, Augusto César Paes
Akama, Alberto
Pieczarka, Julio Cesar
Nagamachi, Cleusa Yoshiko
author_sort Santos da Silva, Kevin
collection PubMed
description Ancistrus is a highly diverse neotropical fish genus that exhibits extensive chromosomal variability, encompassing karyotypic morphology, diploid chromosome number (2n = 34–54), and the evolution of various types of sex chromosome systems. Robertsonian rearrangements related to unstable chromosomal sites are here described. Here, the karyotypes of two Ancistrus species were comparatively analyzed using classical cytogenetic techniques, in addition to isolation, cloning, sequencing, molecular characterization, and fluorescence in situ hybridization of repetitive sequences (i.e., 18S and 5S rDNA; U1, U2, and U5 snDNA; and telomere sequences). The species analyzed here have different karyotypes: Ancistrus sp. 1 (2n = 38, XX/XY) and Ancistrus cirrhosus (2n = 34, no heteromorphic sex chromosomes). Comparative mapping showed different organizations for the analyzed repetitive sequences: 18S and U1 sequences occurred in a single site in all populations of the analyzed species, while 5S and U2 sequences could occur in single or multiple sites. A sequencing analysis confirmed the identities of the U1, U2, and U5 snDNA sequences. Additionally, a syntenic condition for U2-U5 snDNA was found in Ancistrus. In a comparative analysis, the sequences of rDNA and U snDNA showed inter- and intraspecific chromosomal diversification. The occurrence of Robertsonian rearrangements and other dispersal mechanisms of repetitive sequences are discussed.
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spelling pubmed-105323342023-09-28 Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis Santos da Silva, Kevin Glugoski, Larissa Vicari, Marcelo Ricardo de Souza, Augusto César Paes Akama, Alberto Pieczarka, Julio Cesar Nagamachi, Cleusa Yoshiko Int J Mol Sci Article Ancistrus is a highly diverse neotropical fish genus that exhibits extensive chromosomal variability, encompassing karyotypic morphology, diploid chromosome number (2n = 34–54), and the evolution of various types of sex chromosome systems. Robertsonian rearrangements related to unstable chromosomal sites are here described. Here, the karyotypes of two Ancistrus species were comparatively analyzed using classical cytogenetic techniques, in addition to isolation, cloning, sequencing, molecular characterization, and fluorescence in situ hybridization of repetitive sequences (i.e., 18S and 5S rDNA; U1, U2, and U5 snDNA; and telomere sequences). The species analyzed here have different karyotypes: Ancistrus sp. 1 (2n = 38, XX/XY) and Ancistrus cirrhosus (2n = 34, no heteromorphic sex chromosomes). Comparative mapping showed different organizations for the analyzed repetitive sequences: 18S and U1 sequences occurred in a single site in all populations of the analyzed species, while 5S and U2 sequences could occur in single or multiple sites. A sequencing analysis confirmed the identities of the U1, U2, and U5 snDNA sequences. Additionally, a syntenic condition for U2-U5 snDNA was found in Ancistrus. In a comparative analysis, the sequences of rDNA and U snDNA showed inter- and intraspecific chromosomal diversification. The occurrence of Robertsonian rearrangements and other dispersal mechanisms of repetitive sequences are discussed. MDPI 2023-09-15 /pmc/articles/PMC10532334/ /pubmed/37762461 http://dx.doi.org/10.3390/ijms241814159 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Santos da Silva, Kevin
Glugoski, Larissa
Vicari, Marcelo Ricardo
de Souza, Augusto César Paes
Akama, Alberto
Pieczarka, Julio Cesar
Nagamachi, Cleusa Yoshiko
Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title_full Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title_fullStr Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title_full_unstemmed Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title_short Mechanisms of Karyotypic Diversification in Ancistrus (Siluriformes, Loricariidae): Inferences from Repetitive Sequence Analysis
title_sort mechanisms of karyotypic diversification in ancistrus (siluriformes, loricariidae): inferences from repetitive sequence analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10532334/
https://www.ncbi.nlm.nih.gov/pubmed/37762461
http://dx.doi.org/10.3390/ijms241814159
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