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Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm

Image segmentation is a crucial aspect of clinical decision making in medicine, and as such, it has greatly enhanced the sustainability of medical care. Consequently, biomedical image segmentation has become a prominent research area in the field of computer vision. With the advent of deep learning,...

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Autores principales: Khouy, Mohammed, Jabrane, Younes, Ameur, Mustapha, Hajjam El Hassani, Amir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10533074/
https://www.ncbi.nlm.nih.gov/pubmed/37763066
http://dx.doi.org/10.3390/jpm13091298
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author Khouy, Mohammed
Jabrane, Younes
Ameur, Mustapha
Hajjam El Hassani, Amir
author_facet Khouy, Mohammed
Jabrane, Younes
Ameur, Mustapha
Hajjam El Hassani, Amir
author_sort Khouy, Mohammed
collection PubMed
description Image segmentation is a crucial aspect of clinical decision making in medicine, and as such, it has greatly enhanced the sustainability of medical care. Consequently, biomedical image segmentation has become a prominent research area in the field of computer vision. With the advent of deep learning, many manual design-based methods have been proposed and have shown promising results in achieving state-of-the-art performance in biomedical image segmentation. However, these methods often require significant expert knowledge and have an enormous number of parameters, necessitating substantial computational resources. Thus, this paper proposes a new approach called GA-UNet, which employs genetic algorithms to automatically design a U-shape convolution neural network with good performance while minimizing the complexity of its architecture-based parameters, thereby addressing the above challenges. The proposed GA-UNet is evaluated on three datasets: lung image segmentation, cell nuclei segmentation in microscope images (DSB 2018), and liver image segmentation. Interestingly, our experimental results demonstrate that the proposed method achieves competitive performance with a smaller architecture and fewer parameters than the original U-Net model. It achieves an accuracy of 98.78% for lung image segmentation, 95.96% for cell nuclei segmentation in microscope images (DSB 2018), and 98.58% for liver image segmentation by using merely 0.24%, 0.48%, and 0.67% of the number of parameters in the original U-Net architecture for the lung image segmentation dataset, the DSB 2018 dataset, and the liver image segmentation dataset, respectively. This reduction in complexity makes our proposed approach, GA-UNet, a more viable option for deployment in resource-limited environments or real-world implementations that demand more efficient and faster inference times.
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spelling pubmed-105330742023-09-28 Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm Khouy, Mohammed Jabrane, Younes Ameur, Mustapha Hajjam El Hassani, Amir J Pers Med Article Image segmentation is a crucial aspect of clinical decision making in medicine, and as such, it has greatly enhanced the sustainability of medical care. Consequently, biomedical image segmentation has become a prominent research area in the field of computer vision. With the advent of deep learning, many manual design-based methods have been proposed and have shown promising results in achieving state-of-the-art performance in biomedical image segmentation. However, these methods often require significant expert knowledge and have an enormous number of parameters, necessitating substantial computational resources. Thus, this paper proposes a new approach called GA-UNet, which employs genetic algorithms to automatically design a U-shape convolution neural network with good performance while minimizing the complexity of its architecture-based parameters, thereby addressing the above challenges. The proposed GA-UNet is evaluated on three datasets: lung image segmentation, cell nuclei segmentation in microscope images (DSB 2018), and liver image segmentation. Interestingly, our experimental results demonstrate that the proposed method achieves competitive performance with a smaller architecture and fewer parameters than the original U-Net model. It achieves an accuracy of 98.78% for lung image segmentation, 95.96% for cell nuclei segmentation in microscope images (DSB 2018), and 98.58% for liver image segmentation by using merely 0.24%, 0.48%, and 0.67% of the number of parameters in the original U-Net architecture for the lung image segmentation dataset, the DSB 2018 dataset, and the liver image segmentation dataset, respectively. This reduction in complexity makes our proposed approach, GA-UNet, a more viable option for deployment in resource-limited environments or real-world implementations that demand more efficient and faster inference times. MDPI 2023-08-25 /pmc/articles/PMC10533074/ /pubmed/37763066 http://dx.doi.org/10.3390/jpm13091298 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Khouy, Mohammed
Jabrane, Younes
Ameur, Mustapha
Hajjam El Hassani, Amir
Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title_full Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title_fullStr Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title_full_unstemmed Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title_short Medical Image Segmentation Using Automatic Optimized U-Net Architecture Based on Genetic Algorithm
title_sort medical image segmentation using automatic optimized u-net architecture based on genetic algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10533074/
https://www.ncbi.nlm.nih.gov/pubmed/37763066
http://dx.doi.org/10.3390/jpm13091298
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