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Critical Assessment of the Chemical Space Covered by LC–HRMS Non-Targeted Analysis
[Image: see text] Non-targeted analysis (NTA) has emerged as a valuable approach for the comprehensive monitoring of chemicals of emerging concern (CECs) in the exposome. The NTA approach can theoretically identify compounds with diverse physicochemical properties and sources. Even though they are g...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10537454/ https://www.ncbi.nlm.nih.gov/pubmed/37704971 http://dx.doi.org/10.1021/acs.est.3c03606 |
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author | Hulleman, Tobias Turkina, Viktoriia O’Brien, Jake W. Chojnacka, Aleksandra Thomas, Kevin V. Samanipour, Saer |
author_facet | Hulleman, Tobias Turkina, Viktoriia O’Brien, Jake W. Chojnacka, Aleksandra Thomas, Kevin V. Samanipour, Saer |
author_sort | Hulleman, Tobias |
collection | PubMed |
description | [Image: see text] Non-targeted analysis (NTA) has emerged as a valuable approach for the comprehensive monitoring of chemicals of emerging concern (CECs) in the exposome. The NTA approach can theoretically identify compounds with diverse physicochemical properties and sources. Even though they are generic and have a wide scope, non-targeted analysis methods have been shown to have limitations in terms of their coverage of the chemical space, as the number of identified chemicals in each sample is very low (e.g., ≤5%). Investigating the chemical space that is covered by each NTA assay is crucial for understanding the limitations and challenges associated with the workflow, from the experimental methods to the data acquisition and data processing techniques. In this review, we examined recent NTA studies published between 2017 and 2023 that employed liquid chromatography–high-resolution mass spectrometry. The parameters used in each study were documented, and the reported chemicals at confidence levels 1 and 2 were retrieved. The chosen experimental setups and the quality of the reporting were critically evaluated and discussed. Our findings reveal that only around 2% of the estimated chemical space was covered by the NTA studies investigated for this review. Little to no trend was found between the experimental setup and the observed coverage due to the generic and wide scope of the NTA studies. The limited coverage of the chemical space by the reviewed NTA studies highlights the necessity for a more comprehensive approach in the experimental and data processing setups in order to enable the exploration of a broader range of chemical space, with the ultimate goal of protecting human and environmental health. Recommendations for further exploring a wider range of the chemical space are given. |
format | Online Article Text |
id | pubmed-10537454 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-105374542023-09-29 Critical Assessment of the Chemical Space Covered by LC–HRMS Non-Targeted Analysis Hulleman, Tobias Turkina, Viktoriia O’Brien, Jake W. Chojnacka, Aleksandra Thomas, Kevin V. Samanipour, Saer Environ Sci Technol [Image: see text] Non-targeted analysis (NTA) has emerged as a valuable approach for the comprehensive monitoring of chemicals of emerging concern (CECs) in the exposome. The NTA approach can theoretically identify compounds with diverse physicochemical properties and sources. Even though they are generic and have a wide scope, non-targeted analysis methods have been shown to have limitations in terms of their coverage of the chemical space, as the number of identified chemicals in each sample is very low (e.g., ≤5%). Investigating the chemical space that is covered by each NTA assay is crucial for understanding the limitations and challenges associated with the workflow, from the experimental methods to the data acquisition and data processing techniques. In this review, we examined recent NTA studies published between 2017 and 2023 that employed liquid chromatography–high-resolution mass spectrometry. The parameters used in each study were documented, and the reported chemicals at confidence levels 1 and 2 were retrieved. The chosen experimental setups and the quality of the reporting were critically evaluated and discussed. Our findings reveal that only around 2% of the estimated chemical space was covered by the NTA studies investigated for this review. Little to no trend was found between the experimental setup and the observed coverage due to the generic and wide scope of the NTA studies. The limited coverage of the chemical space by the reviewed NTA studies highlights the necessity for a more comprehensive approach in the experimental and data processing setups in order to enable the exploration of a broader range of chemical space, with the ultimate goal of protecting human and environmental health. Recommendations for further exploring a wider range of the chemical space are given. American Chemical Society 2023-09-13 /pmc/articles/PMC10537454/ /pubmed/37704971 http://dx.doi.org/10.1021/acs.est.3c03606 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Hulleman, Tobias Turkina, Viktoriia O’Brien, Jake W. Chojnacka, Aleksandra Thomas, Kevin V. Samanipour, Saer Critical Assessment of the Chemical Space Covered by LC–HRMS Non-Targeted Analysis |
title | Critical
Assessment of the Chemical Space Covered
by LC–HRMS Non-Targeted Analysis |
title_full | Critical
Assessment of the Chemical Space Covered
by LC–HRMS Non-Targeted Analysis |
title_fullStr | Critical
Assessment of the Chemical Space Covered
by LC–HRMS Non-Targeted Analysis |
title_full_unstemmed | Critical
Assessment of the Chemical Space Covered
by LC–HRMS Non-Targeted Analysis |
title_short | Critical
Assessment of the Chemical Space Covered
by LC–HRMS Non-Targeted Analysis |
title_sort | critical
assessment of the chemical space covered
by lc–hrms non-targeted analysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10537454/ https://www.ncbi.nlm.nih.gov/pubmed/37704971 http://dx.doi.org/10.1021/acs.est.3c03606 |
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