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Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients

Post-stroke depression and anxiety, collectively known as post-stroke adverse mental outcome (PSAMO) are common sequelae of stroke. About 30% of stroke survivors develop depression and about 20% develop anxiety. Stroke survivors with PSAMO have poorer health outcomes with higher mortality and greate...

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Autores principales: Oei, Chien Wei, Ng, Eddie Yin Kwee, Ng, Matthew Hok Shan, Tan, Ru-San, Chan, Yam Meng, Chan, Lai Gwen, Acharya, Udyavara Rajendra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538068/
https://www.ncbi.nlm.nih.gov/pubmed/37766004
http://dx.doi.org/10.3390/s23187946
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author Oei, Chien Wei
Ng, Eddie Yin Kwee
Ng, Matthew Hok Shan
Tan, Ru-San
Chan, Yam Meng
Chan, Lai Gwen
Acharya, Udyavara Rajendra
author_facet Oei, Chien Wei
Ng, Eddie Yin Kwee
Ng, Matthew Hok Shan
Tan, Ru-San
Chan, Yam Meng
Chan, Lai Gwen
Acharya, Udyavara Rajendra
author_sort Oei, Chien Wei
collection PubMed
description Post-stroke depression and anxiety, collectively known as post-stroke adverse mental outcome (PSAMO) are common sequelae of stroke. About 30% of stroke survivors develop depression and about 20% develop anxiety. Stroke survivors with PSAMO have poorer health outcomes with higher mortality and greater functional disability. In this study, we aimed to develop a machine learning (ML) model to predict the risk of PSAMO. We retrospectively studied 1780 patients with stroke who were divided into PSAMO vs. no PSAMO groups based on results of validated depression and anxiety questionnaires. The features collected included demographic and sociological data, quality of life scores, stroke-related information, medical and medication history, and comorbidities. Recursive feature elimination was used to select features to input in parallel to eight ML algorithms to train and test the model. Bayesian optimization was used for hyperparameter tuning. Shapley additive explanations (SHAP), an explainable AI (XAI) method, was applied to interpret the model. The best performing ML algorithm was gradient-boosted tree, which attained 74.7% binary classification accuracy. Feature importance calculated by SHAP produced a list of ranked important features that contributed to the prediction, which were consistent with findings of prior clinical studies. Some of these factors were modifiable, and potentially amenable to intervention at early stages of stroke to reduce the incidence of PSAMO.
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spelling pubmed-105380682023-09-29 Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients Oei, Chien Wei Ng, Eddie Yin Kwee Ng, Matthew Hok Shan Tan, Ru-San Chan, Yam Meng Chan, Lai Gwen Acharya, Udyavara Rajendra Sensors (Basel) Communication Post-stroke depression and anxiety, collectively known as post-stroke adverse mental outcome (PSAMO) are common sequelae of stroke. About 30% of stroke survivors develop depression and about 20% develop anxiety. Stroke survivors with PSAMO have poorer health outcomes with higher mortality and greater functional disability. In this study, we aimed to develop a machine learning (ML) model to predict the risk of PSAMO. We retrospectively studied 1780 patients with stroke who were divided into PSAMO vs. no PSAMO groups based on results of validated depression and anxiety questionnaires. The features collected included demographic and sociological data, quality of life scores, stroke-related information, medical and medication history, and comorbidities. Recursive feature elimination was used to select features to input in parallel to eight ML algorithms to train and test the model. Bayesian optimization was used for hyperparameter tuning. Shapley additive explanations (SHAP), an explainable AI (XAI) method, was applied to interpret the model. The best performing ML algorithm was gradient-boosted tree, which attained 74.7% binary classification accuracy. Feature importance calculated by SHAP produced a list of ranked important features that contributed to the prediction, which were consistent with findings of prior clinical studies. Some of these factors were modifiable, and potentially amenable to intervention at early stages of stroke to reduce the incidence of PSAMO. MDPI 2023-09-17 /pmc/articles/PMC10538068/ /pubmed/37766004 http://dx.doi.org/10.3390/s23187946 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Oei, Chien Wei
Ng, Eddie Yin Kwee
Ng, Matthew Hok Shan
Tan, Ru-San
Chan, Yam Meng
Chan, Lai Gwen
Acharya, Udyavara Rajendra
Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title_full Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title_fullStr Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title_full_unstemmed Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title_short Explainable Risk Prediction of Post-Stroke Adverse Mental Outcomes Using Machine Learning Techniques in a Population of 1780 Patients
title_sort explainable risk prediction of post-stroke adverse mental outcomes using machine learning techniques in a population of 1780 patients
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538068/
https://www.ncbi.nlm.nih.gov/pubmed/37766004
http://dx.doi.org/10.3390/s23187946
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