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Unsupervised contrastive peak caller for ATAC-seq

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The assay for transposase-accessible chromatin with sequencing (ATAC-seq) is a common assay to identify chromatin accessible regions by using a Tn5 transposase that can access, cut, and ligate adapters to DNA fragments for subsequent amplification and sequencing. These sequenced regions are quantifi...

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Detalles Bibliográficos
Autores principales:	Vu, Ha T.H., Zhang, Yudi, Tuteja, Geetu, Dorman, Karin S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory Press 2023
Materias:	Methods
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538491/ https://www.ncbi.nlm.nih.gov/pubmed/37217250 http://dx.doi.org/10.1101/gr.277677.123

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