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Ten quick tips for building FAIR workflows

Research data is accumulating rapidly and with it the challenge of fully reproducible science. As a consequence, implementation of high-quality management of scientific data has become a global priority. The FAIR (Findable, Accesible, Interoperable and Reusable) principles provide practical guidelin...

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Autores principales: de Visser, Casper, Johansson, Lennart F., Kulkarni, Purva, Mei, Hailiang, Neerincx, Pieter, Joeri van der Velde, K., Horvatovich, Péter, van Gool, Alain J., Swertz, Morris A., Hoen, Peter A. C. ‘t, Niehues, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538699/
https://www.ncbi.nlm.nih.gov/pubmed/37768885
http://dx.doi.org/10.1371/journal.pcbi.1011369
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author de Visser, Casper
Johansson, Lennart F.
Kulkarni, Purva
Mei, Hailiang
Neerincx, Pieter
Joeri van der Velde, K.
Horvatovich, Péter
van Gool, Alain J.
Swertz, Morris A.
Hoen, Peter A. C. ‘t
Niehues, Anna
author_facet de Visser, Casper
Johansson, Lennart F.
Kulkarni, Purva
Mei, Hailiang
Neerincx, Pieter
Joeri van der Velde, K.
Horvatovich, Péter
van Gool, Alain J.
Swertz, Morris A.
Hoen, Peter A. C. ‘t
Niehues, Anna
author_sort de Visser, Casper
collection PubMed
description Research data is accumulating rapidly and with it the challenge of fully reproducible science. As a consequence, implementation of high-quality management of scientific data has become a global priority. The FAIR (Findable, Accesible, Interoperable and Reusable) principles provide practical guidelines for maximizing the value of research data; however, processing data using workflows—systematic executions of a series of computational tools—is equally important for good data management. The FAIR principles have recently been adapted to Research Software (FAIR4RS Principles) to promote the reproducibility and reusability of any type of research software. Here, we propose a set of 10 quick tips, drafted by experienced workflow developers that will help researchers to apply FAIR4RS principles to workflows. The tips have been arranged according to the FAIR acronym, clarifying the purpose of each tip with respect to the FAIR4RS principles. Altogether, these tips can be seen as practical guidelines for workflow developers who aim to contribute to more reproducible and sustainable computational science, aiming to positively impact the open science and FAIR community.
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spelling pubmed-105386992023-09-29 Ten quick tips for building FAIR workflows de Visser, Casper Johansson, Lennart F. Kulkarni, Purva Mei, Hailiang Neerincx, Pieter Joeri van der Velde, K. Horvatovich, Péter van Gool, Alain J. Swertz, Morris A. Hoen, Peter A. C. ‘t Niehues, Anna PLoS Comput Biol Education Research data is accumulating rapidly and with it the challenge of fully reproducible science. As a consequence, implementation of high-quality management of scientific data has become a global priority. The FAIR (Findable, Accesible, Interoperable and Reusable) principles provide practical guidelines for maximizing the value of research data; however, processing data using workflows—systematic executions of a series of computational tools—is equally important for good data management. The FAIR principles have recently been adapted to Research Software (FAIR4RS Principles) to promote the reproducibility and reusability of any type of research software. Here, we propose a set of 10 quick tips, drafted by experienced workflow developers that will help researchers to apply FAIR4RS principles to workflows. The tips have been arranged according to the FAIR acronym, clarifying the purpose of each tip with respect to the FAIR4RS principles. Altogether, these tips can be seen as practical guidelines for workflow developers who aim to contribute to more reproducible and sustainable computational science, aiming to positively impact the open science and FAIR community. Public Library of Science 2023-09-28 /pmc/articles/PMC10538699/ /pubmed/37768885 http://dx.doi.org/10.1371/journal.pcbi.1011369 Text en © 2023 de Visser et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Education
de Visser, Casper
Johansson, Lennart F.
Kulkarni, Purva
Mei, Hailiang
Neerincx, Pieter
Joeri van der Velde, K.
Horvatovich, Péter
van Gool, Alain J.
Swertz, Morris A.
Hoen, Peter A. C. ‘t
Niehues, Anna
Ten quick tips for building FAIR workflows
title Ten quick tips for building FAIR workflows
title_full Ten quick tips for building FAIR workflows
title_fullStr Ten quick tips for building FAIR workflows
title_full_unstemmed Ten quick tips for building FAIR workflows
title_short Ten quick tips for building FAIR workflows
title_sort ten quick tips for building fair workflows
topic Education
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538699/
https://www.ncbi.nlm.nih.gov/pubmed/37768885
http://dx.doi.org/10.1371/journal.pcbi.1011369
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