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A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study

OBJECTIVE: Successful prognosis is crucial for the management and treatment of osteosarcoma (OSC). This study aimed to predict the cancer-specific survival rate in patients with OSC using deep learning algorithms and classical Cox proportional hazard models to provide data to support individualized...

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Autores principales: Liu, Yang, Xie, Lang, Wang, Dingxue, Xia, Kaide
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538762/
https://www.ncbi.nlm.nih.gov/pubmed/37768965
http://dx.doi.org/10.1371/journal.pone.0286841
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author Liu, Yang
Xie, Lang
Wang, Dingxue
Xia, Kaide
author_facet Liu, Yang
Xie, Lang
Wang, Dingxue
Xia, Kaide
author_sort Liu, Yang
collection PubMed
description OBJECTIVE: Successful prognosis is crucial for the management and treatment of osteosarcoma (OSC). This study aimed to predict the cancer-specific survival rate in patients with OSC using deep learning algorithms and classical Cox proportional hazard models to provide data to support individualized treatment of patients with OSC. METHODS: Data on patients diagnosed with OSC from 2004 to 2017 were obtained from the Surveillance, Epidemiology, and End Results database. The study sample was then divided randomly into a training cohort and a validation cohort in the proportion of 7:3. The DeepSurv algorithm and the Cox proportional hazard model were chosen to construct prognostic models for patients with OSC. The prediction efficacy of the model was estimated using the concordance index (C-index), the integrated Brier score (IBS), the root mean square error (RMSE), and the mean absolute error (SME). RESULTS: A total of 3218 patients were randomized into training and validation groups (n = 2252 and 966, respectively). Both DeepSurv and Cox models had better efficacy in predicting cancer-specific survival (CSS) in OSC patients (C-index >0.74). In the validation of other metrics, DeepSurv did not have superiority over the Cox model in predicting survival in OSC patients. CONCLUSIONS: After validation, our CSS prediction model for patients with OSC based on the DeepSurv algorithm demonstrated satisfactory prediction efficacy and provided a convenient webpage calculator.
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spelling pubmed-105387622023-09-29 A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study Liu, Yang Xie, Lang Wang, Dingxue Xia, Kaide PLoS One Research Article OBJECTIVE: Successful prognosis is crucial for the management and treatment of osteosarcoma (OSC). This study aimed to predict the cancer-specific survival rate in patients with OSC using deep learning algorithms and classical Cox proportional hazard models to provide data to support individualized treatment of patients with OSC. METHODS: Data on patients diagnosed with OSC from 2004 to 2017 were obtained from the Surveillance, Epidemiology, and End Results database. The study sample was then divided randomly into a training cohort and a validation cohort in the proportion of 7:3. The DeepSurv algorithm and the Cox proportional hazard model were chosen to construct prognostic models for patients with OSC. The prediction efficacy of the model was estimated using the concordance index (C-index), the integrated Brier score (IBS), the root mean square error (RMSE), and the mean absolute error (SME). RESULTS: A total of 3218 patients were randomized into training and validation groups (n = 2252 and 966, respectively). Both DeepSurv and Cox models had better efficacy in predicting cancer-specific survival (CSS) in OSC patients (C-index >0.74). In the validation of other metrics, DeepSurv did not have superiority over the Cox model in predicting survival in OSC patients. CONCLUSIONS: After validation, our CSS prediction model for patients with OSC based on the DeepSurv algorithm demonstrated satisfactory prediction efficacy and provided a convenient webpage calculator. Public Library of Science 2023-09-28 /pmc/articles/PMC10538762/ /pubmed/37768965 http://dx.doi.org/10.1371/journal.pone.0286841 Text en © 2023 Liu et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Liu, Yang
Xie, Lang
Wang, Dingxue
Xia, Kaide
A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title_full A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title_fullStr A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title_full_unstemmed A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title_short A deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: A retrospective study
title_sort deep learning algorithm with good prediction efficacy for cancer-specific survival in osteosarcoma: a retrospective study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538762/
https://www.ncbi.nlm.nih.gov/pubmed/37768965
http://dx.doi.org/10.1371/journal.pone.0286841
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