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A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG

PURPOSE: This study focused on the genetic screening of Myocilin (MYOC), Cytochrome P450 family 1 subfamily B member 1 (CYP1B1), Optineurin (OPTN), and SIX homeobox 6 (SIX6) genes in a family with coexistence of primary congenital glaucoma (PCG) and juvenile open-angle glaucoma (JOAG). METHODS: Sang...

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Autores principales: Yadav, Manoj, Yadav, Anshu, Bhardwaj, Aarti, Dhull, Chand Singh, Sachdeva, Sumit, Yadav, Ritu, Tanwar, Mukesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538844/
https://www.ncbi.nlm.nih.gov/pubmed/37530275
http://dx.doi.org/10.4103/IJO.IJO_3383_22
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author Yadav, Manoj
Yadav, Anshu
Bhardwaj, Aarti
Dhull, Chand Singh
Sachdeva, Sumit
Yadav, Ritu
Tanwar, Mukesh
author_facet Yadav, Manoj
Yadav, Anshu
Bhardwaj, Aarti
Dhull, Chand Singh
Sachdeva, Sumit
Yadav, Ritu
Tanwar, Mukesh
author_sort Yadav, Manoj
collection PubMed
description PURPOSE: This study focused on the genetic screening of Myocilin (MYOC), Cytochrome P450 family 1 subfamily B member 1 (CYP1B1), Optineurin (OPTN), and SIX homeobox 6 (SIX6) genes in a family with coexistence of primary congenital glaucoma (PCG) and juvenile open-angle glaucoma (JOAG). METHODS: Sanger sequencing was used to examine the coding region of all four genes. Six different online available algorithms were used for the pathogenicity prediction of missense variant. Structural analysis was done using Garnier–Osguthorpe–Robson (GOR), PyMol, ChimeraX, and Molecular Dynamic (MD) Simulations (using Graphics Processing Unit (GPU)-enabled Desmond module of Schrödinger). RESULTS: There were a total of three sequence variants within the family. All seven algorithms determined that a single mutation, G538E, in the OPTN gene is pathogenic. The loops connecting the strands became more flexible, as predicted structurally and functionally by pathogenic mutations. Mutations create perturbations and conformational rearrangements in proteins, hence impairing their functioning. CONCLUSION: In this study, we describe a North Indian family in which members were having JOAG and PCG due to a rare homozygous/heterozygous mutation in OPTN. The coexistence of two types of glaucoma within a single pedigree suggests that certain OPTN mutations may be responsible for the onset of different glaucoma phenotypes.
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spelling pubmed-105388442023-09-29 A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG Yadav, Manoj Yadav, Anshu Bhardwaj, Aarti Dhull, Chand Singh Sachdeva, Sumit Yadav, Ritu Tanwar, Mukesh Indian J Ophthalmol Original Article PURPOSE: This study focused on the genetic screening of Myocilin (MYOC), Cytochrome P450 family 1 subfamily B member 1 (CYP1B1), Optineurin (OPTN), and SIX homeobox 6 (SIX6) genes in a family with coexistence of primary congenital glaucoma (PCG) and juvenile open-angle glaucoma (JOAG). METHODS: Sanger sequencing was used to examine the coding region of all four genes. Six different online available algorithms were used for the pathogenicity prediction of missense variant. Structural analysis was done using Garnier–Osguthorpe–Robson (GOR), PyMol, ChimeraX, and Molecular Dynamic (MD) Simulations (using Graphics Processing Unit (GPU)-enabled Desmond module of Schrödinger). RESULTS: There were a total of three sequence variants within the family. All seven algorithms determined that a single mutation, G538E, in the OPTN gene is pathogenic. The loops connecting the strands became more flexible, as predicted structurally and functionally by pathogenic mutations. Mutations create perturbations and conformational rearrangements in proteins, hence impairing their functioning. CONCLUSION: In this study, we describe a North Indian family in which members were having JOAG and PCG due to a rare homozygous/heterozygous mutation in OPTN. The coexistence of two types of glaucoma within a single pedigree suggests that certain OPTN mutations may be responsible for the onset of different glaucoma phenotypes. Wolters Kluwer - Medknow 2023-08 2023-08-01 /pmc/articles/PMC10538844/ /pubmed/37530275 http://dx.doi.org/10.4103/IJO.IJO_3383_22 Text en Copyright: © 2023 Indian Journal of Ophthalmology https://creativecommons.org/licenses/by-nc-sa/4.0/This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Yadav, Manoj
Yadav, Anshu
Bhardwaj, Aarti
Dhull, Chand Singh
Sachdeva, Sumit
Yadav, Ritu
Tanwar, Mukesh
A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title_full A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title_fullStr A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title_full_unstemmed A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title_short A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG
title_sort rare optineurin mutation in an indian family with coexistence of joag and pcg
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10538844/
https://www.ncbi.nlm.nih.gov/pubmed/37530275
http://dx.doi.org/10.4103/IJO.IJO_3383_22
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