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Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine
The paramagnetism of a lanthanoid tag site-specifically installed on a protein provides a rich source of structural information accessible by nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopy. Here we report a lanthanoid tag for selective reaction with cysteine...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Copernicus GmbH
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539774/ https://www.ncbi.nlm.nih.gov/pubmed/37904871 http://dx.doi.org/10.5194/mr-3-169-2022 |
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author | Mekkattu Tharayil, Sreelakshmi Mahawaththa, Mithun C. Feintuch, Akiva Maleckis, Ansis Ullrich, Sven Morewood, Richard Maxwell, Michael J. Huber, Thomas Nitsche, Christoph Goldfarb, Daniella Otting, Gottfried |
author_facet | Mekkattu Tharayil, Sreelakshmi Mahawaththa, Mithun C. Feintuch, Akiva Maleckis, Ansis Ullrich, Sven Morewood, Richard Maxwell, Michael J. Huber, Thomas Nitsche, Christoph Goldfarb, Daniella Otting, Gottfried |
author_sort | Mekkattu Tharayil, Sreelakshmi |
collection | PubMed |
description | The paramagnetism of a lanthanoid tag site-specifically installed on a protein provides a rich source of structural information accessible by nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopy. Here we report a lanthanoid tag for selective reaction with cysteine or selenocysteine with formation of a (seleno)thioether bond and a short tether between the lanthanoid ion and the protein backbone. The tag is assembled on the protein in three steps, comprising (i) reaction with 4-fluoro-2,6-dicyanopyridine (FDCP); (ii) reaction of the cyano groups with [Formula: see text] -cysteine, penicillamine or [Formula: see text] -cysteine to complete the lanthanoid chelating moiety; and (iii) titration with a lanthanoid ion. FDCP reacts much faster with selenocysteine than cysteine, opening a route for selective tagging in the presence of solvent-exposed cysteine residues. Loaded with [Formula: see text] and [Formula: see text] ions, pseudocontact shifts were observed in protein NMR spectra, confirming that the tag delivers good immobilisation of the lanthanoid ion relative to the protein, which was also manifested in residual dipolar couplings. Completion of the tag with different 1,2-aminothiol compounds resulted in different magnetic susceptibility tensors. In addition, the tag proved suitable for measuring distance distributions in double electron–electron resonance experiments after titration with [Formula: see text] ions. |
format | Online Article Text |
id | pubmed-10539774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Copernicus GmbH |
record_format | MEDLINE/PubMed |
spelling | pubmed-105397742023-10-30 Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine Mekkattu Tharayil, Sreelakshmi Mahawaththa, Mithun C. Feintuch, Akiva Maleckis, Ansis Ullrich, Sven Morewood, Richard Maxwell, Michael J. Huber, Thomas Nitsche, Christoph Goldfarb, Daniella Otting, Gottfried Magn Reson (Gott) Research Article The paramagnetism of a lanthanoid tag site-specifically installed on a protein provides a rich source of structural information accessible by nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopy. Here we report a lanthanoid tag for selective reaction with cysteine or selenocysteine with formation of a (seleno)thioether bond and a short tether between the lanthanoid ion and the protein backbone. The tag is assembled on the protein in three steps, comprising (i) reaction with 4-fluoro-2,6-dicyanopyridine (FDCP); (ii) reaction of the cyano groups with [Formula: see text] -cysteine, penicillamine or [Formula: see text] -cysteine to complete the lanthanoid chelating moiety; and (iii) titration with a lanthanoid ion. FDCP reacts much faster with selenocysteine than cysteine, opening a route for selective tagging in the presence of solvent-exposed cysteine residues. Loaded with [Formula: see text] and [Formula: see text] ions, pseudocontact shifts were observed in protein NMR spectra, confirming that the tag delivers good immobilisation of the lanthanoid ion relative to the protein, which was also manifested in residual dipolar couplings. Completion of the tag with different 1,2-aminothiol compounds resulted in different magnetic susceptibility tensors. In addition, the tag proved suitable for measuring distance distributions in double electron–electron resonance experiments after titration with [Formula: see text] ions. Copernicus GmbH 2022-09-13 /pmc/articles/PMC10539774/ /pubmed/37904871 http://dx.doi.org/10.5194/mr-3-169-2022 Text en Copyright: © 2022 Sreelakshmi Mekkattu Tharayil et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Article Mekkattu Tharayil, Sreelakshmi Mahawaththa, Mithun C. Feintuch, Akiva Maleckis, Ansis Ullrich, Sven Morewood, Richard Maxwell, Michael J. Huber, Thomas Nitsche, Christoph Goldfarb, Daniella Otting, Gottfried Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title | Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title_full | Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title_fullStr | Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title_full_unstemmed | Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title_short | Site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
title_sort | site-selective generation of lanthanoid binding sites on proteins using 4-fluoro-2,6-dicyanopyridine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539774/ https://www.ncbi.nlm.nih.gov/pubmed/37904871 http://dx.doi.org/10.5194/mr-3-169-2022 |
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