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Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Copernicus GmbH
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539831/ https://www.ncbi.nlm.nih.gov/pubmed/37905226 http://dx.doi.org/10.5194/mr-2-557-2021 |
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author | Kauffmann, Clemens Ceccolini, Irene Kontaxis, Georg Konrat, Robert |
author_facet | Kauffmann, Clemens Ceccolini, Irene Kontaxis, Georg Konrat, Robert |
author_sort | Kauffmann, Clemens |
collection | PubMed |
description | Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group thoroughly investigated the intricate relaxation properties of these “forbidden fruits” and developed experimental techniques to reveal the relevance of previously largely ignored cross-correlated relaxation (CCR) effects, as “the essential is invisible to the eyes”. Here we consider CCR within the challenging context of intrinsically disordered proteins (IDPs) and emphasize its potential and relevance for the studies of structural dynamics of IDPs in the future years to come. Conventionally, dynamics of globularly folded proteins are modeled and understood as deviations from otherwise rigid structures tumbling in solution. However, with increasing protein flexibility, as observed for IDPs, this apparent dichotomy between structure and dynamics becomes blurred. Although complex dynamics and ensemble averaging might impair the extraction of mechanistic details even further, spin relaxation uniquely encodes a protein's structural memory. Due to significant methodological developments, such as high-dimensional non-uniform sampling techniques, spin relaxation in IDPs can now be monitored in unprecedented resolution. Not embedded within a rigid globular fold, conventional [Formula: see text] spin probes might not suffice to capture the inherently local nature of IDP dynamics. To better describe and understand possible segmental motions of IDPs, we propose an experimental approach to detect the signature of anisotropic segmental dynamics by quantifying cross-correlated spin relaxation of individual [Formula: see text] and [Formula: see text] spin pairs. By adapting Geoffrey Bodenhausen's symmetrical reconversion principle to obtain zero frequency spectral density values, we can define and demonstrate more sensitive means to characterize anisotropic dynamics in IDPs. |
format | Online Article Text |
id | pubmed-10539831 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Copernicus GmbH |
record_format | MEDLINE/PubMed |
spelling | pubmed-105398312023-10-30 Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation Kauffmann, Clemens Ceccolini, Irene Kontaxis, Georg Konrat, Robert Magn Reson (Gott) Research Article Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group thoroughly investigated the intricate relaxation properties of these “forbidden fruits” and developed experimental techniques to reveal the relevance of previously largely ignored cross-correlated relaxation (CCR) effects, as “the essential is invisible to the eyes”. Here we consider CCR within the challenging context of intrinsically disordered proteins (IDPs) and emphasize its potential and relevance for the studies of structural dynamics of IDPs in the future years to come. Conventionally, dynamics of globularly folded proteins are modeled and understood as deviations from otherwise rigid structures tumbling in solution. However, with increasing protein flexibility, as observed for IDPs, this apparent dichotomy between structure and dynamics becomes blurred. Although complex dynamics and ensemble averaging might impair the extraction of mechanistic details even further, spin relaxation uniquely encodes a protein's structural memory. Due to significant methodological developments, such as high-dimensional non-uniform sampling techniques, spin relaxation in IDPs can now be monitored in unprecedented resolution. Not embedded within a rigid globular fold, conventional [Formula: see text] spin probes might not suffice to capture the inherently local nature of IDP dynamics. To better describe and understand possible segmental motions of IDPs, we propose an experimental approach to detect the signature of anisotropic segmental dynamics by quantifying cross-correlated spin relaxation of individual [Formula: see text] and [Formula: see text] spin pairs. By adapting Geoffrey Bodenhausen's symmetrical reconversion principle to obtain zero frequency spectral density values, we can define and demonstrate more sensitive means to characterize anisotropic dynamics in IDPs. Copernicus GmbH 2021-07-06 /pmc/articles/PMC10539831/ /pubmed/37905226 http://dx.doi.org/10.5194/mr-2-557-2021 Text en Copyright: © 2021 Clemens Kauffmann et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Article Kauffmann, Clemens Ceccolini, Irene Kontaxis, Georg Konrat, Robert Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title | Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title_full | Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title_fullStr | Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title_full_unstemmed | Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title_short | Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
title_sort | detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539831/ https://www.ncbi.nlm.nih.gov/pubmed/37905226 http://dx.doi.org/10.5194/mr-2-557-2021 |
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