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Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation

Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group...

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Autores principales: Kauffmann, Clemens, Ceccolini, Irene, Kontaxis, Georg, Konrat, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Copernicus GmbH 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539831/
https://www.ncbi.nlm.nih.gov/pubmed/37905226
http://dx.doi.org/10.5194/mr-2-557-2021
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author Kauffmann, Clemens
Ceccolini, Irene
Kontaxis, Georg
Konrat, Robert
author_facet Kauffmann, Clemens
Ceccolini, Irene
Kontaxis, Georg
Konrat, Robert
author_sort Kauffmann, Clemens
collection PubMed
description Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group thoroughly investigated the intricate relaxation properties of these “forbidden fruits” and developed experimental techniques to reveal the relevance of previously largely ignored cross-correlated relaxation (CCR) effects, as “the essential is invisible to the eyes”. Here we consider CCR within the challenging context of intrinsically disordered proteins (IDPs) and emphasize its potential and relevance for the studies of structural dynamics of IDPs in the future years to come. Conventionally, dynamics of globularly folded proteins are modeled and understood as deviations from otherwise rigid structures tumbling in solution. However, with increasing protein flexibility, as observed for IDPs, this apparent dichotomy between structure and dynamics becomes blurred. Although complex dynamics and ensemble averaging might impair the extraction of mechanistic details even further, spin relaxation uniquely encodes a protein's structural memory. Due to significant methodological developments, such as high-dimensional non-uniform sampling techniques, spin relaxation in IDPs can now be monitored in unprecedented resolution. Not embedded within a rigid globular fold, conventional [Formula: see text] spin probes might not suffice to capture the inherently local nature of IDP dynamics. To better describe and understand possible segmental motions of IDPs, we propose an experimental approach to detect the signature of anisotropic segmental dynamics by quantifying cross-correlated spin relaxation of individual [Formula: see text] and [Formula: see text] spin pairs. By adapting Geoffrey Bodenhausen's symmetrical reconversion principle to obtain zero frequency spectral density values, we can define and demonstrate more sensitive means to characterize anisotropic dynamics in IDPs.
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spelling pubmed-105398312023-10-30 Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation Kauffmann, Clemens Ceccolini, Irene Kontaxis, Georg Konrat, Robert Magn Reson (Gott) Research Article Among the numerous contributions of Geoffrey Bodenhausen to NMR spectroscopy, his developments in the field of spin-relaxation methodology and theory will definitely have a long lasting impact. Starting with his seminal contributions to the excitation of multiple-quantum coherences, he and his group thoroughly investigated the intricate relaxation properties of these “forbidden fruits” and developed experimental techniques to reveal the relevance of previously largely ignored cross-correlated relaxation (CCR) effects, as “the essential is invisible to the eyes”. Here we consider CCR within the challenging context of intrinsically disordered proteins (IDPs) and emphasize its potential and relevance for the studies of structural dynamics of IDPs in the future years to come. Conventionally, dynamics of globularly folded proteins are modeled and understood as deviations from otherwise rigid structures tumbling in solution. However, with increasing protein flexibility, as observed for IDPs, this apparent dichotomy between structure and dynamics becomes blurred. Although complex dynamics and ensemble averaging might impair the extraction of mechanistic details even further, spin relaxation uniquely encodes a protein's structural memory. Due to significant methodological developments, such as high-dimensional non-uniform sampling techniques, spin relaxation in IDPs can now be monitored in unprecedented resolution. Not embedded within a rigid globular fold, conventional [Formula: see text] spin probes might not suffice to capture the inherently local nature of IDP dynamics. To better describe and understand possible segmental motions of IDPs, we propose an experimental approach to detect the signature of anisotropic segmental dynamics by quantifying cross-correlated spin relaxation of individual [Formula: see text] and [Formula: see text] spin pairs. By adapting Geoffrey Bodenhausen's symmetrical reconversion principle to obtain zero frequency spectral density values, we can define and demonstrate more sensitive means to characterize anisotropic dynamics in IDPs. Copernicus GmbH 2021-07-06 /pmc/articles/PMC10539831/ /pubmed/37905226 http://dx.doi.org/10.5194/mr-2-557-2021 Text en Copyright: © 2021 Clemens Kauffmann et al. https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/
spellingShingle Research Article
Kauffmann, Clemens
Ceccolini, Irene
Kontaxis, Georg
Konrat, Robert
Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title_full Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title_fullStr Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title_full_unstemmed Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title_short Detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
title_sort detecting anisotropic segmental dynamics in disordered proteins by cross-correlated spin relaxation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10539831/
https://www.ncbi.nlm.nih.gov/pubmed/37905226
http://dx.doi.org/10.5194/mr-2-557-2021
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