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Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency

Histone chaperones–structurally diverse, non-catalytic proteins enriched with acidic intrinsically disordered regions (IDRs)–protect histones from spurious nucleic acid interactions and guide their deposition into and out of nucleosomes. Despite their conservation and ubiquity, the function of the c...

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Autores principales: Lorton, Benjamin M., Warren, Christopher, Ilyas, Humaira, Nandigrami, Prithviraj, Hegde, Subray, Cahill, Sean, Lehman, Stephanie M, Shabanowitz, Jeffrey, Hunt, Donald F., Fiser, Andras, Cowburn, David, Shechter, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10542154/
https://www.ncbi.nlm.nih.gov/pubmed/37790377
http://dx.doi.org/10.1101/2023.09.18.558337
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author Lorton, Benjamin M.
Warren, Christopher
Ilyas, Humaira
Nandigrami, Prithviraj
Hegde, Subray
Cahill, Sean
Lehman, Stephanie M
Shabanowitz, Jeffrey
Hunt, Donald F.
Fiser, Andras
Cowburn, David
Shechter, David
author_facet Lorton, Benjamin M.
Warren, Christopher
Ilyas, Humaira
Nandigrami, Prithviraj
Hegde, Subray
Cahill, Sean
Lehman, Stephanie M
Shabanowitz, Jeffrey
Hunt, Donald F.
Fiser, Andras
Cowburn, David
Shechter, David
author_sort Lorton, Benjamin M.
collection PubMed
description Histone chaperones–structurally diverse, non-catalytic proteins enriched with acidic intrinsically disordered regions (IDRs)–protect histones from spurious nucleic acid interactions and guide their deposition into and out of nucleosomes. Despite their conservation and ubiquity, the function of the chaperone acidic IDRs remains unclear. Here, we show that the Xenopus laevis Npm2 and Nap1 acidic IDRs are substrates for TTLL4 (Tubulin Tyrosine Ligase Like 4)-catalyzed post-translational glutamate-glutamylation. We demonstrate that, to bind, stabilize, and deposit histones into nucleosomes, chaperone acidic IDRs function as DNA mimetics. Our biochemical, computational, and biophysical studies reveal that glutamylation of these chaperone polyelectrolyte acidic stretches functions to enhance DNA electrostatic mimicry, promoting the binding and stabilization of H2A/H2B heterodimers and facilitating nucleosome assembly. This discovery provides insights into both the previously unclear function of the acidic IDRs and the regulatory role of post-translational modifications in chromatin dynamics.
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spelling pubmed-105421542023-10-03 Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency Lorton, Benjamin M. Warren, Christopher Ilyas, Humaira Nandigrami, Prithviraj Hegde, Subray Cahill, Sean Lehman, Stephanie M Shabanowitz, Jeffrey Hunt, Donald F. Fiser, Andras Cowburn, David Shechter, David bioRxiv Article Histone chaperones–structurally diverse, non-catalytic proteins enriched with acidic intrinsically disordered regions (IDRs)–protect histones from spurious nucleic acid interactions and guide their deposition into and out of nucleosomes. Despite their conservation and ubiquity, the function of the chaperone acidic IDRs remains unclear. Here, we show that the Xenopus laevis Npm2 and Nap1 acidic IDRs are substrates for TTLL4 (Tubulin Tyrosine Ligase Like 4)-catalyzed post-translational glutamate-glutamylation. We demonstrate that, to bind, stabilize, and deposit histones into nucleosomes, chaperone acidic IDRs function as DNA mimetics. Our biochemical, computational, and biophysical studies reveal that glutamylation of these chaperone polyelectrolyte acidic stretches functions to enhance DNA electrostatic mimicry, promoting the binding and stabilization of H2A/H2B heterodimers and facilitating nucleosome assembly. This discovery provides insights into both the previously unclear function of the acidic IDRs and the regulatory role of post-translational modifications in chromatin dynamics. Cold Spring Harbor Laboratory 2023-09-19 /pmc/articles/PMC10542154/ /pubmed/37790377 http://dx.doi.org/10.1101/2023.09.18.558337 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Lorton, Benjamin M.
Warren, Christopher
Ilyas, Humaira
Nandigrami, Prithviraj
Hegde, Subray
Cahill, Sean
Lehman, Stephanie M
Shabanowitz, Jeffrey
Hunt, Donald F.
Fiser, Andras
Cowburn, David
Shechter, David
Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title_full Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title_fullStr Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title_full_unstemmed Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title_short Glutamylation of Npm2 and Nap1 acidic disordered regions increases DNA charge mimicry to enhance chaperone efficiency
title_sort glutamylation of npm2 and nap1 acidic disordered regions increases dna charge mimicry to enhance chaperone efficiency
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10542154/
https://www.ncbi.nlm.nih.gov/pubmed/37790377
http://dx.doi.org/10.1101/2023.09.18.558337
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