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Detection of Parvovirus B19 genome in human heart tissue samples

OBJECTIVE: Identifying viral genomes in human heart tissues is critical for disease diagnosis and assessment of cardiovascular damage. Human heart tissue samples obtained during a biopsy procedure are routinely used to test for the presence of viruses, as guided by clinical manifestations and progno...

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Autores principales: Kloc, Anna, Campbell, Kenneth S., Espinoza, Yarida A. Urbina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10542668/
https://www.ncbi.nlm.nih.gov/pubmed/37775826
http://dx.doi.org/10.1186/s13104-023-06527-4
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author Kloc, Anna
Campbell, Kenneth S.
Espinoza, Yarida A. Urbina
author_facet Kloc, Anna
Campbell, Kenneth S.
Espinoza, Yarida A. Urbina
author_sort Kloc, Anna
collection PubMed
description OBJECTIVE: Identifying viral genomes in human heart tissues is critical for disease diagnosis and assessment of cardiovascular damage. Human heart tissue samples obtained during a biopsy procedure are routinely used to test for the presence of viruses, as guided by clinical manifestations and prognosis. Furthermore, heart tissue samples obtained post-mortem or during a cardiac transplant procedure serve as a valuable research tool, as they allow for an in-depth assessment of cardiac pathology that can aid in our understanding of molecular pathways associated with disease. Because viral nucleic acid constitutes only a small portion of each sample’s genetic material, appropriate methods are necessary for positive viral genome identification. RESULTS: Snap-frozen heart tissue samples obtained either post-mortem or during a cardiac transplant procedure were used to develop conditions for detection of Parvovirus B19. Briefly, total DNA was isolated from the heart tissue under varying conditions. A PCR-based assay with Parvovirus B19 specific primers was implemented to detect the presence of the viral genome, followed by Sanger Sequencing. The mechanical disruption of the heart tissue, as well as the cardiac tissue processing methods, had a significant effect on the DNA quality and the ability to detect the Parvovirus B19 genome.
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spelling pubmed-105426682023-10-03 Detection of Parvovirus B19 genome in human heart tissue samples Kloc, Anna Campbell, Kenneth S. Espinoza, Yarida A. Urbina BMC Res Notes Research Note OBJECTIVE: Identifying viral genomes in human heart tissues is critical for disease diagnosis and assessment of cardiovascular damage. Human heart tissue samples obtained during a biopsy procedure are routinely used to test for the presence of viruses, as guided by clinical manifestations and prognosis. Furthermore, heart tissue samples obtained post-mortem or during a cardiac transplant procedure serve as a valuable research tool, as they allow for an in-depth assessment of cardiac pathology that can aid in our understanding of molecular pathways associated with disease. Because viral nucleic acid constitutes only a small portion of each sample’s genetic material, appropriate methods are necessary for positive viral genome identification. RESULTS: Snap-frozen heart tissue samples obtained either post-mortem or during a cardiac transplant procedure were used to develop conditions for detection of Parvovirus B19. Briefly, total DNA was isolated from the heart tissue under varying conditions. A PCR-based assay with Parvovirus B19 specific primers was implemented to detect the presence of the viral genome, followed by Sanger Sequencing. The mechanical disruption of the heart tissue, as well as the cardiac tissue processing methods, had a significant effect on the DNA quality and the ability to detect the Parvovirus B19 genome. BioMed Central 2023-09-29 /pmc/articles/PMC10542668/ /pubmed/37775826 http://dx.doi.org/10.1186/s13104-023-06527-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research Note
Kloc, Anna
Campbell, Kenneth S.
Espinoza, Yarida A. Urbina
Detection of Parvovirus B19 genome in human heart tissue samples
title Detection of Parvovirus B19 genome in human heart tissue samples
title_full Detection of Parvovirus B19 genome in human heart tissue samples
title_fullStr Detection of Parvovirus B19 genome in human heart tissue samples
title_full_unstemmed Detection of Parvovirus B19 genome in human heart tissue samples
title_short Detection of Parvovirus B19 genome in human heart tissue samples
title_sort detection of parvovirus b19 genome in human heart tissue samples
topic Research Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10542668/
https://www.ncbi.nlm.nih.gov/pubmed/37775826
http://dx.doi.org/10.1186/s13104-023-06527-4
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