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Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches
BACKGROUND: Although conventional prediction models for surgical patients often ignore intraoperative time-series data, deep learning approaches are well-suited to incorporate time-varying and non-linear data with complex interactions. Blood lactate concentration is one important clinical marker tha...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543087/ https://www.ncbi.nlm.nih.gov/pubmed/37790131 http://dx.doi.org/10.3389/fmed.2023.1165912 |
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author | Kobayashi, Yuta Peng, Yu-Chung Yu, Evan Bush, Brian Jung, Youn-Hoa Murphy, Zachary Goeddel, Lee Whitman, Glenn Venkataraman, Archana Brown, Charles H. |
author_facet | Kobayashi, Yuta Peng, Yu-Chung Yu, Evan Bush, Brian Jung, Youn-Hoa Murphy, Zachary Goeddel, Lee Whitman, Glenn Venkataraman, Archana Brown, Charles H. |
author_sort | Kobayashi, Yuta |
collection | PubMed |
description | BACKGROUND: Although conventional prediction models for surgical patients often ignore intraoperative time-series data, deep learning approaches are well-suited to incorporate time-varying and non-linear data with complex interactions. Blood lactate concentration is one important clinical marker that can reflect the adequacy of systemic perfusion during cardiac surgery. During cardiac surgery and cardiopulmonary bypass, minute-level data is available on key parameters that affect perfusion. The goal of this study was to use machine learning and deep learning approaches to predict maximum blood lactate concentrations after cardiac surgery. We hypothesized that models using minute-level intraoperative data as inputs would have the best predictive performance. METHODS: Adults who underwent cardiac surgery with cardiopulmonary bypass were eligible. The primary outcome was maximum lactate concentration within 24 h postoperatively. We considered three classes of predictive models, using the performance metric of mean absolute error across testing folds: (1) static models using baseline preoperative variables, (2) augmentation of the static models with intraoperative statistics, and (3) a dynamic approach that integrates preoperative variables with intraoperative time series data. RESULTS: 2,187 patients were included. For three models that only used baseline characteristics (linear regression, random forest, artificial neural network) to predict maximum postoperative lactate concentration, the prediction error ranged from a median of 2.52 mmol/L (IQR 2.46, 2.56) to 2.58 mmol/L (IQR 2.54, 2.60). The inclusion of intraoperative summary statistics (including intraoperative lactate concentration) improved model performance, with the prediction error ranging from a median of 2.09 mmol/L (IQR 2.04, 2.14) to 2.12 mmol/L (IQR 2.06, 2.16). For two modelling approaches (recurrent neural network, transformer) that can utilize intraoperative time-series data, the lowest prediction error was obtained with a range of median 1.96 mmol/L (IQR 1.87, 2.05) to 1.97 mmol/L (IQR 1.92, 2.05). Intraoperative lactate concentration was the most important predictive feature based on Shapley additive values. Anemia and weight were also important predictors, but there was heterogeneity in the importance of other features. CONCLUSION: Postoperative lactate concentrations can be predicted using baseline and intraoperative data with moderate accuracy. These results reflect the value of intraoperative data in the prediction of clinically relevant outcomes to guide perioperative management. |
format | Online Article Text |
id | pubmed-10543087 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105430872023-10-03 Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches Kobayashi, Yuta Peng, Yu-Chung Yu, Evan Bush, Brian Jung, Youn-Hoa Murphy, Zachary Goeddel, Lee Whitman, Glenn Venkataraman, Archana Brown, Charles H. Front Med (Lausanne) Medicine BACKGROUND: Although conventional prediction models for surgical patients often ignore intraoperative time-series data, deep learning approaches are well-suited to incorporate time-varying and non-linear data with complex interactions. Blood lactate concentration is one important clinical marker that can reflect the adequacy of systemic perfusion during cardiac surgery. During cardiac surgery and cardiopulmonary bypass, minute-level data is available on key parameters that affect perfusion. The goal of this study was to use machine learning and deep learning approaches to predict maximum blood lactate concentrations after cardiac surgery. We hypothesized that models using minute-level intraoperative data as inputs would have the best predictive performance. METHODS: Adults who underwent cardiac surgery with cardiopulmonary bypass were eligible. The primary outcome was maximum lactate concentration within 24 h postoperatively. We considered three classes of predictive models, using the performance metric of mean absolute error across testing folds: (1) static models using baseline preoperative variables, (2) augmentation of the static models with intraoperative statistics, and (3) a dynamic approach that integrates preoperative variables with intraoperative time series data. RESULTS: 2,187 patients were included. For three models that only used baseline characteristics (linear regression, random forest, artificial neural network) to predict maximum postoperative lactate concentration, the prediction error ranged from a median of 2.52 mmol/L (IQR 2.46, 2.56) to 2.58 mmol/L (IQR 2.54, 2.60). The inclusion of intraoperative summary statistics (including intraoperative lactate concentration) improved model performance, with the prediction error ranging from a median of 2.09 mmol/L (IQR 2.04, 2.14) to 2.12 mmol/L (IQR 2.06, 2.16). For two modelling approaches (recurrent neural network, transformer) that can utilize intraoperative time-series data, the lowest prediction error was obtained with a range of median 1.96 mmol/L (IQR 1.87, 2.05) to 1.97 mmol/L (IQR 1.92, 2.05). Intraoperative lactate concentration was the most important predictive feature based on Shapley additive values. Anemia and weight were also important predictors, but there was heterogeneity in the importance of other features. CONCLUSION: Postoperative lactate concentrations can be predicted using baseline and intraoperative data with moderate accuracy. These results reflect the value of intraoperative data in the prediction of clinically relevant outcomes to guide perioperative management. Frontiers Media S.A. 2023-09-14 /pmc/articles/PMC10543087/ /pubmed/37790131 http://dx.doi.org/10.3389/fmed.2023.1165912 Text en Copyright © 2023 Kobayashi, Peng, Yu, Bush, Jung, Murphy, Goeddel, Whitman, Venkataraman and Brown. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Kobayashi, Yuta Peng, Yu-Chung Yu, Evan Bush, Brian Jung, Youn-Hoa Murphy, Zachary Goeddel, Lee Whitman, Glenn Venkataraman, Archana Brown, Charles H. Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title | Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title_full | Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title_fullStr | Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title_full_unstemmed | Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title_short | Prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
title_sort | prediction of lactate concentrations after cardiac surgery using machine learning and deep learning approaches |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543087/ https://www.ncbi.nlm.nih.gov/pubmed/37790131 http://dx.doi.org/10.3389/fmed.2023.1165912 |
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