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Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis

The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targete...

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Autores principales: Lv, Liyang, Qi, Xiaolong, Wang, Chun, Ma, Yutong, Nie, Yuling, Abulaiti, Renaguli, Zhang, Fang, Shi, Qiping, Kou, Zhen, Abuduer, Muhebaier, Zhai, Shunsheng, An, Li, Huang, Qin, Gu, Zailinuer, Ou, Qiuxiang, Liu, Hong, Wang, Zengsheng, Shao, Yang, Sun, Zhenzhu, Fu, Ling, Wang, Xiaomin, Mao, Min, Li, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543145/
https://www.ncbi.nlm.nih.gov/pubmed/36811800
http://dx.doi.org/10.1007/s10238-023-01018-z
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author Lv, Liyang
Qi, Xiaolong
Wang, Chun
Ma, Yutong
Nie, Yuling
Abulaiti, Renaguli
Zhang, Fang
Shi, Qiping
Kou, Zhen
Abuduer, Muhebaier
Zhai, Shunsheng
An, Li
Huang, Qin
Gu, Zailinuer
Ou, Qiuxiang
Liu, Hong
Wang, Zengsheng
Shao, Yang
Sun, Zhenzhu
Fu, Ling
Wang, Xiaomin
Mao, Min
Li, Yan
author_facet Lv, Liyang
Qi, Xiaolong
Wang, Chun
Ma, Yutong
Nie, Yuling
Abulaiti, Renaguli
Zhang, Fang
Shi, Qiping
Kou, Zhen
Abuduer, Muhebaier
Zhai, Shunsheng
An, Li
Huang, Qin
Gu, Zailinuer
Ou, Qiuxiang
Liu, Hong
Wang, Zengsheng
Shao, Yang
Sun, Zhenzhu
Fu, Ling
Wang, Xiaomin
Mao, Min
Li, Yan
author_sort Lv, Liyang
collection PubMed
description The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targeted next-generation sequencing (NGS) for mutational profiling, whose clinical reports were retrospectively reviewed. In this cohort, the subgroup of old DLBCL patients (age at diagnosis > 60, N = 80) exhibited significantly higher Eastern Cooperative Oncology Group scores and International Prognostic Index than their young counterparts (age at diagnosis ≤ 60, N = 68). As revealed by the NGS results, PIM1 (43.9%), KMT2D (31.8%), MYD88 (29.7%), and CD79B (27.0%) were identified as the most frequently mutated genes. Aberrations of genes of the immune escape pathway were significantly enriched in the young subgroup, while the altered epigenetic regulators were more abundant in the old patients. FAT4 mutation was identified as a positive prognostic biomarker, associated with longer progression-free survival and overall survival in the entire cohort and the old subgroup, using the Cox regression analyses. However, the prognostic function of FAT4 was not reproduced in the young subgroup. We comprehensively analyzed the pathological and molecular characteristics of old and young DLBCL patients and demonstrated the prognostic value of FAT4 mutation, which requires further validation with sizable cohorts in future research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10238-023-01018-z.
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spelling pubmed-105431452023-10-03 Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis Lv, Liyang Qi, Xiaolong Wang, Chun Ma, Yutong Nie, Yuling Abulaiti, Renaguli Zhang, Fang Shi, Qiping Kou, Zhen Abuduer, Muhebaier Zhai, Shunsheng An, Li Huang, Qin Gu, Zailinuer Ou, Qiuxiang Liu, Hong Wang, Zengsheng Shao, Yang Sun, Zhenzhu Fu, Ling Wang, Xiaomin Mao, Min Li, Yan Clin Exp Med Research The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targeted next-generation sequencing (NGS) for mutational profiling, whose clinical reports were retrospectively reviewed. In this cohort, the subgroup of old DLBCL patients (age at diagnosis > 60, N = 80) exhibited significantly higher Eastern Cooperative Oncology Group scores and International Prognostic Index than their young counterparts (age at diagnosis ≤ 60, N = 68). As revealed by the NGS results, PIM1 (43.9%), KMT2D (31.8%), MYD88 (29.7%), and CD79B (27.0%) were identified as the most frequently mutated genes. Aberrations of genes of the immune escape pathway were significantly enriched in the young subgroup, while the altered epigenetic regulators were more abundant in the old patients. FAT4 mutation was identified as a positive prognostic biomarker, associated with longer progression-free survival and overall survival in the entire cohort and the old subgroup, using the Cox regression analyses. However, the prognostic function of FAT4 was not reproduced in the young subgroup. We comprehensively analyzed the pathological and molecular characteristics of old and young DLBCL patients and demonstrated the prognostic value of FAT4 mutation, which requires further validation with sizable cohorts in future research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10238-023-01018-z. Springer International Publishing 2023-02-22 2023 /pmc/articles/PMC10543145/ /pubmed/36811800 http://dx.doi.org/10.1007/s10238-023-01018-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
Lv, Liyang
Qi, Xiaolong
Wang, Chun
Ma, Yutong
Nie, Yuling
Abulaiti, Renaguli
Zhang, Fang
Shi, Qiping
Kou, Zhen
Abuduer, Muhebaier
Zhai, Shunsheng
An, Li
Huang, Qin
Gu, Zailinuer
Ou, Qiuxiang
Liu, Hong
Wang, Zengsheng
Shao, Yang
Sun, Zhenzhu
Fu, Ling
Wang, Xiaomin
Mao, Min
Li, Yan
Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title_full Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title_fullStr Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title_full_unstemmed Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title_short Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
title_sort identification of fat4 as a positive prognostic biomarker in dlbcl by comprehensive genomic analysis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543145/
https://www.ncbi.nlm.nih.gov/pubmed/36811800
http://dx.doi.org/10.1007/s10238-023-01018-z
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