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Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis
The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targete...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543145/ https://www.ncbi.nlm.nih.gov/pubmed/36811800 http://dx.doi.org/10.1007/s10238-023-01018-z |
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author | Lv, Liyang Qi, Xiaolong Wang, Chun Ma, Yutong Nie, Yuling Abulaiti, Renaguli Zhang, Fang Shi, Qiping Kou, Zhen Abuduer, Muhebaier Zhai, Shunsheng An, Li Huang, Qin Gu, Zailinuer Ou, Qiuxiang Liu, Hong Wang, Zengsheng Shao, Yang Sun, Zhenzhu Fu, Ling Wang, Xiaomin Mao, Min Li, Yan |
author_facet | Lv, Liyang Qi, Xiaolong Wang, Chun Ma, Yutong Nie, Yuling Abulaiti, Renaguli Zhang, Fang Shi, Qiping Kou, Zhen Abuduer, Muhebaier Zhai, Shunsheng An, Li Huang, Qin Gu, Zailinuer Ou, Qiuxiang Liu, Hong Wang, Zengsheng Shao, Yang Sun, Zhenzhu Fu, Ling Wang, Xiaomin Mao, Min Li, Yan |
author_sort | Lv, Liyang |
collection | PubMed |
description | The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targeted next-generation sequencing (NGS) for mutational profiling, whose clinical reports were retrospectively reviewed. In this cohort, the subgroup of old DLBCL patients (age at diagnosis > 60, N = 80) exhibited significantly higher Eastern Cooperative Oncology Group scores and International Prognostic Index than their young counterparts (age at diagnosis ≤ 60, N = 68). As revealed by the NGS results, PIM1 (43.9%), KMT2D (31.8%), MYD88 (29.7%), and CD79B (27.0%) were identified as the most frequently mutated genes. Aberrations of genes of the immune escape pathway were significantly enriched in the young subgroup, while the altered epigenetic regulators were more abundant in the old patients. FAT4 mutation was identified as a positive prognostic biomarker, associated with longer progression-free survival and overall survival in the entire cohort and the old subgroup, using the Cox regression analyses. However, the prognostic function of FAT4 was not reproduced in the young subgroup. We comprehensively analyzed the pathological and molecular characteristics of old and young DLBCL patients and demonstrated the prognostic value of FAT4 mutation, which requires further validation with sizable cohorts in future research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10238-023-01018-z. |
format | Online Article Text |
id | pubmed-10543145 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-105431452023-10-03 Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis Lv, Liyang Qi, Xiaolong Wang, Chun Ma, Yutong Nie, Yuling Abulaiti, Renaguli Zhang, Fang Shi, Qiping Kou, Zhen Abuduer, Muhebaier Zhai, Shunsheng An, Li Huang, Qin Gu, Zailinuer Ou, Qiuxiang Liu, Hong Wang, Zengsheng Shao, Yang Sun, Zhenzhu Fu, Ling Wang, Xiaomin Mao, Min Li, Yan Clin Exp Med Research The molecular landscapes of diffuse large B-cell lymphoma (DLBCL) remained to be comprehensively investigated with an urgent need to identify novel prognostic biomarkers guiding prognostic stratification and disease monitoring. Baseline tumor samples of 148 DLBCL patients were analyzed using targeted next-generation sequencing (NGS) for mutational profiling, whose clinical reports were retrospectively reviewed. In this cohort, the subgroup of old DLBCL patients (age at diagnosis > 60, N = 80) exhibited significantly higher Eastern Cooperative Oncology Group scores and International Prognostic Index than their young counterparts (age at diagnosis ≤ 60, N = 68). As revealed by the NGS results, PIM1 (43.9%), KMT2D (31.8%), MYD88 (29.7%), and CD79B (27.0%) were identified as the most frequently mutated genes. Aberrations of genes of the immune escape pathway were significantly enriched in the young subgroup, while the altered epigenetic regulators were more abundant in the old patients. FAT4 mutation was identified as a positive prognostic biomarker, associated with longer progression-free survival and overall survival in the entire cohort and the old subgroup, using the Cox regression analyses. However, the prognostic function of FAT4 was not reproduced in the young subgroup. We comprehensively analyzed the pathological and molecular characteristics of old and young DLBCL patients and demonstrated the prognostic value of FAT4 mutation, which requires further validation with sizable cohorts in future research. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10238-023-01018-z. Springer International Publishing 2023-02-22 2023 /pmc/articles/PMC10543145/ /pubmed/36811800 http://dx.doi.org/10.1007/s10238-023-01018-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Lv, Liyang Qi, Xiaolong Wang, Chun Ma, Yutong Nie, Yuling Abulaiti, Renaguli Zhang, Fang Shi, Qiping Kou, Zhen Abuduer, Muhebaier Zhai, Shunsheng An, Li Huang, Qin Gu, Zailinuer Ou, Qiuxiang Liu, Hong Wang, Zengsheng Shao, Yang Sun, Zhenzhu Fu, Ling Wang, Xiaomin Mao, Min Li, Yan Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title | Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title_full | Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title_fullStr | Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title_full_unstemmed | Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title_short | Identification of FAT4 as a positive prognostic biomarker in DLBCL by comprehensive genomic analysis |
title_sort | identification of fat4 as a positive prognostic biomarker in dlbcl by comprehensive genomic analysis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543145/ https://www.ncbi.nlm.nih.gov/pubmed/36811800 http://dx.doi.org/10.1007/s10238-023-01018-z |
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