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Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya

BACKGROUND: Tuberculosis (TB) is a major public health concern, particularly among people living with the Human immunodeficiency Virus (PLWH). Accurate prediction of TB disease in this population is crucial for early diagnosis and effective treatment. Logistic regression and regularized machine lear...

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Autores principales: orwa, James, Oduor, Patience, Okelloh, Douglas, Gethi, Dickson, Agaya, Janet, Okumu, Albert, Wandiga, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543507/
https://www.ncbi.nlm.nih.gov/pubmed/37790564
http://dx.doi.org/10.21203/rs.3.rs-3354948/v1
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author orwa, James
Oduor, Patience
Okelloh, Douglas
Gethi, Dickson
Agaya, Janet
Okumu, Albert
Wandiga, Steve
author_facet orwa, James
Oduor, Patience
Okelloh, Douglas
Gethi, Dickson
Agaya, Janet
Okumu, Albert
Wandiga, Steve
author_sort orwa, James
collection PubMed
description BACKGROUND: Tuberculosis (TB) is a major public health concern, particularly among people living with the Human immunodeficiency Virus (PLWH). Accurate prediction of TB disease in this population is crucial for early diagnosis and effective treatment. Logistic regression and regularized machine learning methods have been used to predict TB, but their comparative performance in HIV patients remains unclear. The study aims to compare the predictive performance of logistic regression with that of regularized machine learning methods for TB disease in HIV patients. METHODS: Retrospective analysis of data from HIV patients diagnosed with TB in three hospitals in Kisumu County (JOOTRH, Kisumu sub-county hospital, Lumumba health center) between [dates]. Logistic regression, Lasso, Ridge, Elastic net regression were used to develop predictive models for TB disease. Model performance was evaluated using accuracy, and area under the receiver operating characteristic curve (AUC-ROC). RESULTS: Of the 927 PLWH included in the study, 107 (12.6%) were diagnosed with TB. Being in WHO disease stage III/IV (aOR: 7.13; 95%CI: 3.86–13.33) and having a cough in the last 4 weeks (aOR: 2.34;95%CI: 1.43–3.89) were significant associated with the TB. Logistic regression achieved accuracy of 0.868, and AUC-ROC of 0.744. Elastic net regression also showed good predictive performance with accuracy, and AUC-ROC values of 0.874 and 0.762, respectively. CONCLUSIONS: Our results suggest that logistic regression, Lasso, Ridge regression, and Elastic net can all be effective methods for predicting TB disease in HIV patients. These findings may have important implications for the development of accurate and reliable models for TB prediction in HIV patients.
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spelling pubmed-105435072023-10-03 Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya orwa, James Oduor, Patience Okelloh, Douglas Gethi, Dickson Agaya, Janet Okumu, Albert Wandiga, Steve Res Sq Article BACKGROUND: Tuberculosis (TB) is a major public health concern, particularly among people living with the Human immunodeficiency Virus (PLWH). Accurate prediction of TB disease in this population is crucial for early diagnosis and effective treatment. Logistic regression and regularized machine learning methods have been used to predict TB, but their comparative performance in HIV patients remains unclear. The study aims to compare the predictive performance of logistic regression with that of regularized machine learning methods for TB disease in HIV patients. METHODS: Retrospective analysis of data from HIV patients diagnosed with TB in three hospitals in Kisumu County (JOOTRH, Kisumu sub-county hospital, Lumumba health center) between [dates]. Logistic regression, Lasso, Ridge, Elastic net regression were used to develop predictive models for TB disease. Model performance was evaluated using accuracy, and area under the receiver operating characteristic curve (AUC-ROC). RESULTS: Of the 927 PLWH included in the study, 107 (12.6%) were diagnosed with TB. Being in WHO disease stage III/IV (aOR: 7.13; 95%CI: 3.86–13.33) and having a cough in the last 4 weeks (aOR: 2.34;95%CI: 1.43–3.89) were significant associated with the TB. Logistic regression achieved accuracy of 0.868, and AUC-ROC of 0.744. Elastic net regression also showed good predictive performance with accuracy, and AUC-ROC values of 0.874 and 0.762, respectively. CONCLUSIONS: Our results suggest that logistic regression, Lasso, Ridge regression, and Elastic net can all be effective methods for predicting TB disease in HIV patients. These findings may have important implications for the development of accurate and reliable models for TB prediction in HIV patients. American Journal Experts 2023-09-21 /pmc/articles/PMC10543507/ /pubmed/37790564 http://dx.doi.org/10.21203/rs.3.rs-3354948/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
orwa, James
Oduor, Patience
Okelloh, Douglas
Gethi, Dickson
Agaya, Janet
Okumu, Albert
Wandiga, Steve
Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title_full Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title_fullStr Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title_full_unstemmed Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title_short Comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with HIV: cross-sectional hospital-based study in Kisumu County, Kenya
title_sort comparison of logistic regression with regularized machine learning methods for the prediction of tuberculosis disease in people living with hiv: cross-sectional hospital-based study in kisumu county, kenya
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10543507/
https://www.ncbi.nlm.nih.gov/pubmed/37790564
http://dx.doi.org/10.21203/rs.3.rs-3354948/v1
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