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Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients

BACKGROUND: Familial dilated cardiomyopathy (DCM) causes heart failure and may lead to heart transplantation. DCM is typically a monogenic disorder with autosomal dominant inheritance. Currently disease-causing variants have been reported in over 60 genes that encode proteins in sarcomeres, nuclear...

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Autores principales: Heliö, Krista, Cicerchia, Marcos, Hathaway, Julie, Tommiska, Johanna, Huusko, Johanna, Saarinen, Inka, Koskinen, Lotta, Muona, Mikko, Kytölä, Ville, Djupsjöbacka, Janica, Gentile, Massimiliano, Salmenperä, Pertteli, Alastalo, Tero-Pekka, Steinberg, Christian, Heliö, Tiina, Paananen, Jussi, Myllykangas, Samuel, Koskenvuo, Juha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10546047/
https://www.ncbi.nlm.nih.gov/pubmed/37795486
http://dx.doi.org/10.3389/fcvm.2023.1254272
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author Heliö, Krista
Cicerchia, Marcos
Hathaway, Julie
Tommiska, Johanna
Huusko, Johanna
Saarinen, Inka
Koskinen, Lotta
Muona, Mikko
Kytölä, Ville
Djupsjöbacka, Janica
Gentile, Massimiliano
Salmenperä, Pertteli
Alastalo, Tero-Pekka
Steinberg, Christian
Heliö, Tiina
Paananen, Jussi
Myllykangas, Samuel
Koskenvuo, Juha
author_facet Heliö, Krista
Cicerchia, Marcos
Hathaway, Julie
Tommiska, Johanna
Huusko, Johanna
Saarinen, Inka
Koskinen, Lotta
Muona, Mikko
Kytölä, Ville
Djupsjöbacka, Janica
Gentile, Massimiliano
Salmenperä, Pertteli
Alastalo, Tero-Pekka
Steinberg, Christian
Heliö, Tiina
Paananen, Jussi
Myllykangas, Samuel
Koskenvuo, Juha
author_sort Heliö, Krista
collection PubMed
description BACKGROUND: Familial dilated cardiomyopathy (DCM) causes heart failure and may lead to heart transplantation. DCM is typically a monogenic disorder with autosomal dominant inheritance. Currently disease-causing variants have been reported in over 60 genes that encode proteins in sarcomeres, nuclear lamina, desmosomes, cytoskeleton, and mitochondria. Over half of the patients undergoing comprehensive genetic testing are left without a molecular diagnosis even when patient selection follows strict DCM criteria. METHODS AND RESULTS: This study was a retrospective review of patients referred for genetic testing at Blueprint Genetics due to suspected inherited DCM. Next generation sequencing panels included 23–316 genes associated with cardiomyopathies and other monogenic cardiac diseases. Variants were considered diagnostic if classified as pathogenic (P) or likely pathogenic (LP). Of the 2,088 patients 514 (24.6%) obtained a molecular diagnosis; 534 LP/P variants were observed across 45 genes, 2.7% (14/514) had two diagnostic variants in dominant genes. Nine copy number variants were identified: two multigene and seven intragenic. Diagnostic variants were observed most often in TTN (45.3%), DSP (6.7%), LMNA (6.7%), and MYH7 (5.2%). Clinical characteristics independently associated with molecular diagnosis were: a lower age at diagnosis, family history of DCM, paroxysmal atrial fibrillation, absence of left bundle branch block, and the presence of an implantable cardioverter-defibrillator. CONCLUSIONS: Panel testing provides good diagnostic yield in patients with clinically suspected DCM. Causative variants were identified in 45 genes. In minority, two diagnostic variants were observed in dominant genes. Our results support the use of genetic panels in clinical settings in DCM patients with suspected genetic etiology.
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spelling pubmed-105460472023-10-04 Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients Heliö, Krista Cicerchia, Marcos Hathaway, Julie Tommiska, Johanna Huusko, Johanna Saarinen, Inka Koskinen, Lotta Muona, Mikko Kytölä, Ville Djupsjöbacka, Janica Gentile, Massimiliano Salmenperä, Pertteli Alastalo, Tero-Pekka Steinberg, Christian Heliö, Tiina Paananen, Jussi Myllykangas, Samuel Koskenvuo, Juha Front Cardiovasc Med Cardiovascular Medicine BACKGROUND: Familial dilated cardiomyopathy (DCM) causes heart failure and may lead to heart transplantation. DCM is typically a monogenic disorder with autosomal dominant inheritance. Currently disease-causing variants have been reported in over 60 genes that encode proteins in sarcomeres, nuclear lamina, desmosomes, cytoskeleton, and mitochondria. Over half of the patients undergoing comprehensive genetic testing are left without a molecular diagnosis even when patient selection follows strict DCM criteria. METHODS AND RESULTS: This study was a retrospective review of patients referred for genetic testing at Blueprint Genetics due to suspected inherited DCM. Next generation sequencing panels included 23–316 genes associated with cardiomyopathies and other monogenic cardiac diseases. Variants were considered diagnostic if classified as pathogenic (P) or likely pathogenic (LP). Of the 2,088 patients 514 (24.6%) obtained a molecular diagnosis; 534 LP/P variants were observed across 45 genes, 2.7% (14/514) had two diagnostic variants in dominant genes. Nine copy number variants were identified: two multigene and seven intragenic. Diagnostic variants were observed most often in TTN (45.3%), DSP (6.7%), LMNA (6.7%), and MYH7 (5.2%). Clinical characteristics independently associated with molecular diagnosis were: a lower age at diagnosis, family history of DCM, paroxysmal atrial fibrillation, absence of left bundle branch block, and the presence of an implantable cardioverter-defibrillator. CONCLUSIONS: Panel testing provides good diagnostic yield in patients with clinically suspected DCM. Causative variants were identified in 45 genes. In minority, two diagnostic variants were observed in dominant genes. Our results support the use of genetic panels in clinical settings in DCM patients with suspected genetic etiology. Frontiers Media S.A. 2023-09-19 /pmc/articles/PMC10546047/ /pubmed/37795486 http://dx.doi.org/10.3389/fcvm.2023.1254272 Text en © 2023 Heliö, Cicerchia, Hathaway, Tommiska, Huusko, Saarinen, Koskinen, Muona, Kytölä, Djupsjöbacka, Gentile, Salmenperä, Alastalo, Steinberg, Heliö, Paananen, Myllykangas and Koskenvuo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Heliö, Krista
Cicerchia, Marcos
Hathaway, Julie
Tommiska, Johanna
Huusko, Johanna
Saarinen, Inka
Koskinen, Lotta
Muona, Mikko
Kytölä, Ville
Djupsjöbacka, Janica
Gentile, Massimiliano
Salmenperä, Pertteli
Alastalo, Tero-Pekka
Steinberg, Christian
Heliö, Tiina
Paananen, Jussi
Myllykangas, Samuel
Koskenvuo, Juha
Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title_full Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title_fullStr Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title_full_unstemmed Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title_short Diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 DCM patients
title_sort diagnostic yield of genetic testing in a multinational heterogeneous cohort of 2088 dcm patients
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10546047/
https://www.ncbi.nlm.nih.gov/pubmed/37795486
http://dx.doi.org/10.3389/fcvm.2023.1254272
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