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Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system

Eragrostis curvula is an agronomically and ecologically undesirable perennial tussock grass dispersed across Australia. The objective of this study is to investigate relationships of ecologically relevant abiotic variables with the presence of E. curvula at a landscape scale in the Snowy Monaro regi...

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Autores principales: Brown, J., Merchant, A., Ingram, L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10547844/
https://www.ncbi.nlm.nih.gov/pubmed/37789139
http://dx.doi.org/10.1038/s41598-023-43667-w
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author Brown, J.
Merchant, A.
Ingram, L.
author_facet Brown, J.
Merchant, A.
Ingram, L.
author_sort Brown, J.
collection PubMed
description Eragrostis curvula is an agronomically and ecologically undesirable perennial tussock grass dispersed across Australia. The objective of this study is to investigate relationships of ecologically relevant abiotic variables with the presence of E. curvula at a landscape scale in the Snowy Monaro region, Australia. Through vegetation surveys across 21 privately owned properties and freely available ancillary data on E. curvula presence, we used seven predictor variables, including Sentinel 2 NDVI reflectance, topography, distance from roads and watercourses and climate, to predict the presence or absence of E. curvula across its invaded range using a random forest (RF) algorithm. Assessment of performance metrics resulted in a pseudo-R squared of 0.96, a kappa of 0.97 and an R squared for out-of-bag samples of 0.67. Temperature had the largest influence on the model’s performance, followed by linear features such as highways and rivers. Highways’ high importance in the model may indicate that the presence or absence of E. curvula is related to the density of human transit, thus as a vector of E. curvula propagule dispersal. Further, humans’ tendency to reside adjacent to rivers may indicate that E. curvula’s presence or absence is related to human density and E. curvula’s potential to spread via water courses.
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spelling pubmed-105478442023-10-05 Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system Brown, J. Merchant, A. Ingram, L. Sci Rep Article Eragrostis curvula is an agronomically and ecologically undesirable perennial tussock grass dispersed across Australia. The objective of this study is to investigate relationships of ecologically relevant abiotic variables with the presence of E. curvula at a landscape scale in the Snowy Monaro region, Australia. Through vegetation surveys across 21 privately owned properties and freely available ancillary data on E. curvula presence, we used seven predictor variables, including Sentinel 2 NDVI reflectance, topography, distance from roads and watercourses and climate, to predict the presence or absence of E. curvula across its invaded range using a random forest (RF) algorithm. Assessment of performance metrics resulted in a pseudo-R squared of 0.96, a kappa of 0.97 and an R squared for out-of-bag samples of 0.67. Temperature had the largest influence on the model’s performance, followed by linear features such as highways and rivers. Highways’ high importance in the model may indicate that the presence or absence of E. curvula is related to the density of human transit, thus as a vector of E. curvula propagule dispersal. Further, humans’ tendency to reside adjacent to rivers may indicate that E. curvula’s presence or absence is related to human density and E. curvula’s potential to spread via water courses. Nature Publishing Group UK 2023-10-03 /pmc/articles/PMC10547844/ /pubmed/37789139 http://dx.doi.org/10.1038/s41598-023-43667-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Brown, J.
Merchant, A.
Ingram, L.
Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title_full Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title_fullStr Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title_full_unstemmed Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title_short Utilising random forests in the modelling of Eragrostis curvula presence and absence in an Australian grassland system
title_sort utilising random forests in the modelling of eragrostis curvula presence and absence in an australian grassland system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10547844/
https://www.ncbi.nlm.nih.gov/pubmed/37789139
http://dx.doi.org/10.1038/s41598-023-43667-w
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