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PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images

OBJECTIVE: To investigate the correlation between CT imaging features and pathological subtypes of pulmonary nodules and construct a prediction model using deep learning. METHODS: We collected information of patients with pulmonary nodules treated by surgery and the reference standard for diagnosis...

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Autores principales: Zhang, Yuchong, Qu, Hui, Tian, Yumeng, Na, Fangjian, Yan, Jinshan, Wu, Ying, Cui, Xiaoyu, Li, Zhi, Zhao, Mingfang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10548640/
https://www.ncbi.nlm.nih.gov/pubmed/37789252
http://dx.doi.org/10.1186/s12885-023-11364-6
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author Zhang, Yuchong
Qu, Hui
Tian, Yumeng
Na, Fangjian
Yan, Jinshan
Wu, Ying
Cui, Xiaoyu
Li, Zhi
Zhao, Mingfang
author_facet Zhang, Yuchong
Qu, Hui
Tian, Yumeng
Na, Fangjian
Yan, Jinshan
Wu, Ying
Cui, Xiaoyu
Li, Zhi
Zhao, Mingfang
author_sort Zhang, Yuchong
collection PubMed
description OBJECTIVE: To investigate the correlation between CT imaging features and pathological subtypes of pulmonary nodules and construct a prediction model using deep learning. METHODS: We collected information of patients with pulmonary nodules treated by surgery and the reference standard for diagnosis was post-operative pathology. After using elastic distortion for data augmentation, the CT images were divided into a training set, a validation set and a test set in a ratio of 6:2:2. We used PB-LNet to analyze the nodules in pre-operative CT and predict their pathological subtypes. Accuracy was used as the model evaluation index and Class Activation Map was applied to interpreting the results. Comparative experiments with other models were carried out to achieve the best results. Finally, images from the test set without data augmentation were analyzed to judge the clinical utility. RESULTS: Four hundred seventy-seven patients were included and the nodules were divided into six groups: benign lesions, precursor glandular lesions, minimally invasive adenocarcinoma, invasive adenocarcinoma Grade 1, Grade 2 and Grade 3. The accuracy of the test set was 0.84. Class Activation Map confirmed that PB-LNet classified the nodules mainly based on the lungs in CT images, which is in line with the actual situation in clinical practice. In comparative experiments, PB-LNet obtained the highest accuracy. Finally, 96 images from the test set without data augmentation were analyzed and the accuracy was 0.89. CONCLUSIONS: In classifying CT images of lung nodules into six categories based on pathological subtypes, PB-LNet demonstrates satisfactory accuracy without the need of delineating nodules, while the results are interpretable. A high level of accuracy was also obtained when validating on real data, therefore demonstrates its usefulness in clinical practice.
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spelling pubmed-105486402023-10-05 PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images Zhang, Yuchong Qu, Hui Tian, Yumeng Na, Fangjian Yan, Jinshan Wu, Ying Cui, Xiaoyu Li, Zhi Zhao, Mingfang BMC Cancer Research OBJECTIVE: To investigate the correlation between CT imaging features and pathological subtypes of pulmonary nodules and construct a prediction model using deep learning. METHODS: We collected information of patients with pulmonary nodules treated by surgery and the reference standard for diagnosis was post-operative pathology. After using elastic distortion for data augmentation, the CT images were divided into a training set, a validation set and a test set in a ratio of 6:2:2. We used PB-LNet to analyze the nodules in pre-operative CT and predict their pathological subtypes. Accuracy was used as the model evaluation index and Class Activation Map was applied to interpreting the results. Comparative experiments with other models were carried out to achieve the best results. Finally, images from the test set without data augmentation were analyzed to judge the clinical utility. RESULTS: Four hundred seventy-seven patients were included and the nodules were divided into six groups: benign lesions, precursor glandular lesions, minimally invasive adenocarcinoma, invasive adenocarcinoma Grade 1, Grade 2 and Grade 3. The accuracy of the test set was 0.84. Class Activation Map confirmed that PB-LNet classified the nodules mainly based on the lungs in CT images, which is in line with the actual situation in clinical practice. In comparative experiments, PB-LNet obtained the highest accuracy. Finally, 96 images from the test set without data augmentation were analyzed and the accuracy was 0.89. CONCLUSIONS: In classifying CT images of lung nodules into six categories based on pathological subtypes, PB-LNet demonstrates satisfactory accuracy without the need of delineating nodules, while the results are interpretable. A high level of accuracy was also obtained when validating on real data, therefore demonstrates its usefulness in clinical practice. BioMed Central 2023-10-03 /pmc/articles/PMC10548640/ /pubmed/37789252 http://dx.doi.org/10.1186/s12885-023-11364-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Zhang, Yuchong
Qu, Hui
Tian, Yumeng
Na, Fangjian
Yan, Jinshan
Wu, Ying
Cui, Xiaoyu
Li, Zhi
Zhao, Mingfang
PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title_full PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title_fullStr PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title_full_unstemmed PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title_short PB-LNet: a model for predicting pathological subtypes of pulmonary nodules on CT images
title_sort pb-lnet: a model for predicting pathological subtypes of pulmonary nodules on ct images
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10548640/
https://www.ncbi.nlm.nih.gov/pubmed/37789252
http://dx.doi.org/10.1186/s12885-023-11364-6
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