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Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor

Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization...

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Detalles Bibliográficos
Autores principales: Yasuzawa, Yosuke, Shibuya, Risa, Senga, Yukako, Miyafusa, Takamitsu, Honda, Shinya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10549227/
https://www.ncbi.nlm.nih.gov/pubmed/37574212
http://dx.doi.org/10.1002/2211-5463.13692
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author Yasuzawa, Yosuke
Shibuya, Risa
Senga, Yukako
Miyafusa, Takamitsu
Honda, Shinya
author_facet Yasuzawa, Yosuke
Shibuya, Risa
Senga, Yukako
Miyafusa, Takamitsu
Honda, Shinya
author_sort Yasuzawa, Yosuke
collection PubMed
description Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization method. However, the relationship between connector length and protein stability has not been completely elucidated. Here, we determined the most stable connector length for granulocyte colony‐stimulating factor by changing one residue at a time to produce connector length variants and then measuring their thermal stability. Analysis of the local structures obtained from the predicted structures of the circularized variants revealed that an approach using helix length, dihedral backbone angle, and number of unbonded hydrogen bond donors and acceptors is suitable for identifying connector lengths with higher stability.
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spelling pubmed-105492272023-10-05 Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor Yasuzawa, Yosuke Shibuya, Risa Senga, Yukako Miyafusa, Takamitsu Honda, Shinya FEBS Open Bio Research Articles Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization method. However, the relationship between connector length and protein stability has not been completely elucidated. Here, we determined the most stable connector length for granulocyte colony‐stimulating factor by changing one residue at a time to produce connector length variants and then measuring their thermal stability. Analysis of the local structures obtained from the predicted structures of the circularized variants revealed that an approach using helix length, dihedral backbone angle, and number of unbonded hydrogen bond donors and acceptors is suitable for identifying connector lengths with higher stability. John Wiley and Sons Inc. 2023-08-24 /pmc/articles/PMC10549227/ /pubmed/37574212 http://dx.doi.org/10.1002/2211-5463.13692 Text en © 2023 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Yasuzawa, Yosuke
Shibuya, Risa
Senga, Yukako
Miyafusa, Takamitsu
Honda, Shinya
Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title_full Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title_fullStr Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title_full_unstemmed Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title_short Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
title_sort determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10549227/
https://www.ncbi.nlm.nih.gov/pubmed/37574212
http://dx.doi.org/10.1002/2211-5463.13692
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