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Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor
Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10549227/ https://www.ncbi.nlm.nih.gov/pubmed/37574212 http://dx.doi.org/10.1002/2211-5463.13692 |
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author | Yasuzawa, Yosuke Shibuya, Risa Senga, Yukako Miyafusa, Takamitsu Honda, Shinya |
author_facet | Yasuzawa, Yosuke Shibuya, Risa Senga, Yukako Miyafusa, Takamitsu Honda, Shinya |
author_sort | Yasuzawa, Yosuke |
collection | PubMed |
description | Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization method. However, the relationship between connector length and protein stability has not been completely elucidated. Here, we determined the most stable connector length for granulocyte colony‐stimulating factor by changing one residue at a time to produce connector length variants and then measuring their thermal stability. Analysis of the local structures obtained from the predicted structures of the circularized variants revealed that an approach using helix length, dihedral backbone angle, and number of unbonded hydrogen bond donors and acceptors is suitable for identifying connector lengths with higher stability. |
format | Online Article Text |
id | pubmed-10549227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105492272023-10-05 Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor Yasuzawa, Yosuke Shibuya, Risa Senga, Yukako Miyafusa, Takamitsu Honda, Shinya FEBS Open Bio Research Articles Improving protein stability is important for industrial applications, and one promising method for achieving this is backbone circularization. As connector length affects stability, predicting and elucidating a more stable connector length is necessary for development of the backbone circularization method. However, the relationship between connector length and protein stability has not been completely elucidated. Here, we determined the most stable connector length for granulocyte colony‐stimulating factor by changing one residue at a time to produce connector length variants and then measuring their thermal stability. Analysis of the local structures obtained from the predicted structures of the circularized variants revealed that an approach using helix length, dihedral backbone angle, and number of unbonded hydrogen bond donors and acceptors is suitable for identifying connector lengths with higher stability. John Wiley and Sons Inc. 2023-08-24 /pmc/articles/PMC10549227/ /pubmed/37574212 http://dx.doi.org/10.1002/2211-5463.13692 Text en © 2023 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Yasuzawa, Yosuke Shibuya, Risa Senga, Yukako Miyafusa, Takamitsu Honda, Shinya Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title | Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title_full | Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title_fullStr | Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title_full_unstemmed | Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title_short | Determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
title_sort | determination of the optimal connector length to enhance stability of backbone‐circularized granulocyte colony‐stimulating factor |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10549227/ https://www.ncbi.nlm.nih.gov/pubmed/37574212 http://dx.doi.org/10.1002/2211-5463.13692 |
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