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Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer

Targeting immunogenic cell death (ICD) may enable the response of pancreatic cancer to immune checkpoint inhibitors (ICIs). The aim of the present study was to elucidate the role of ICD-related genes in pancreatic cancer. Utilizing the k-means method, consensus clustering was employed to effectively...

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Autores principales: Yu, Wenjing, Li, Mei, Xia, Jing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10551861/
https://www.ncbi.nlm.nih.gov/pubmed/37809045
http://dx.doi.org/10.3892/ol.2023.14061
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author Yu, Wenjing
Li, Mei
Xia, Jing
author_facet Yu, Wenjing
Li, Mei
Xia, Jing
author_sort Yu, Wenjing
collection PubMed
description Targeting immunogenic cell death (ICD) may enable the response of pancreatic cancer to immune checkpoint inhibitors (ICIs). The aim of the present study was to elucidate the role of ICD-related genes in pancreatic cancer. Utilizing the k-means method, consensus clustering was employed to effectively group patients with pancreatic cancer. Subsequently, a set of differentially expressed genes was identified between the two subtypes related to ICD, facilitating the execution of a comprehensive enrichment analysis. Furthermore, the construction of an ICD-related prognostic signature (IRPS) was accomplished through LASSO Cox regression, thereby enabling the assessment of responses to both chemotherapy and immunotherapy. In addition, the biological functionality of 5′-nucleotidase ecto (NT5E) was elucidated through experimental investigations. Patients characterized as the ICD high subtype experienced a comparatively shorter overall survival. This subtype exhibited a noteworthy correlation with HLA families and immune checkpoint molecules, underscoring its immunological significance. Subsequently, patients with elevated IRPS risk scores displayed resistance towards immunotherapy interventions. Of note, synergistic downregulation of NT5E in combination with Gemcitabine was observed to significantly induce tumor cell apoptosis, emphasizing its potential therapeutic value. Leveraging ICD-related genes, a novel classification system was meticulously devised to comprehensively evaluate both the clinical outcomes and therapeutic responses of patients diagnosed with pancreatic cancer.
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spelling pubmed-105518612023-10-06 Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer Yu, Wenjing Li, Mei Xia, Jing Oncol Lett Articles Targeting immunogenic cell death (ICD) may enable the response of pancreatic cancer to immune checkpoint inhibitors (ICIs). The aim of the present study was to elucidate the role of ICD-related genes in pancreatic cancer. Utilizing the k-means method, consensus clustering was employed to effectively group patients with pancreatic cancer. Subsequently, a set of differentially expressed genes was identified between the two subtypes related to ICD, facilitating the execution of a comprehensive enrichment analysis. Furthermore, the construction of an ICD-related prognostic signature (IRPS) was accomplished through LASSO Cox regression, thereby enabling the assessment of responses to both chemotherapy and immunotherapy. In addition, the biological functionality of 5′-nucleotidase ecto (NT5E) was elucidated through experimental investigations. Patients characterized as the ICD high subtype experienced a comparatively shorter overall survival. This subtype exhibited a noteworthy correlation with HLA families and immune checkpoint molecules, underscoring its immunological significance. Subsequently, patients with elevated IRPS risk scores displayed resistance towards immunotherapy interventions. Of note, synergistic downregulation of NT5E in combination with Gemcitabine was observed to significantly induce tumor cell apoptosis, emphasizing its potential therapeutic value. Leveraging ICD-related genes, a novel classification system was meticulously devised to comprehensively evaluate both the clinical outcomes and therapeutic responses of patients diagnosed with pancreatic cancer. D.A. Spandidos 2023-09-20 /pmc/articles/PMC10551861/ /pubmed/37809045 http://dx.doi.org/10.3892/ol.2023.14061 Text en Copyright: © Yu et al. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Yu, Wenjing
Li, Mei
Xia, Jing
Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title_full Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title_fullStr Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title_full_unstemmed Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title_short Identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
title_sort identification of immunogenic cell death‑related prognostic signatures in pancreatic cancer
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10551861/
https://www.ncbi.nlm.nih.gov/pubmed/37809045
http://dx.doi.org/10.3892/ol.2023.14061
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