Cargando…
RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma
Receptor activity modifying protein 1 (RAMP1) facilitates the localization of the calcitonin-like receptor (CLR) to the plasma membrane, but its role in osteosarcoma (OS) remains unclear. We evaluated the RAMP1 expression and prognostic value across different cancers, studying tumor immune infiltrat...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10553254/ https://www.ncbi.nlm.nih.gov/pubmed/37796823 http://dx.doi.org/10.1371/journal.pone.0292452 |
_version_ | 1785116126009622528 |
---|---|
author | Xie, Long Xiao, Weiwei Fang, Hangqi Liu, Guoqiang |
author_facet | Xie, Long Xiao, Weiwei Fang, Hangqi Liu, Guoqiang |
author_sort | Xie, Long |
collection | PubMed |
description | Receptor activity modifying protein 1 (RAMP1) facilitates the localization of the calcitonin-like receptor (CLR) to the plasma membrane, but its role in osteosarcoma (OS) remains unclear. We evaluated the RAMP1 expression and prognostic value across different cancers, studying tumor immune infiltration. The prognostic value was analyzed using the GSE39058 and TARGET datasets. Differential gene expression was evaluated. a protein-protein interaction network was constructed, and gene set enrichment analysis was performed. The function of RAMP1 in the tumor microenvironment was analyzed, and its expression in OS cell lines was validated using quantitative real-time PCR. High RAMP1 expression correlated with poor prognosis relative to low RAMP1 expression (p < 0.05). Low RAMP1 expression correlated with an abundance of CD4+ memory-activated T cells. whereas a high expression level correlated with a high proportion of gamma-delta T cells (γδ T cells). Differentially expressed genes from TARGET was enriched in olfactory transduction pathways (normalized enrichment scores [NES] = 1.6998, p < 0.0001). RAMP1 expression negatively correlated with CD44 expression but positively correlated with TNFSF9 expression. The RAMP1 gene is substantially expressed in OS cells compared to the normal osteoblast cell line hFOB1.19. Thus, RAMP1 may be a prognostic biomarker and potential therapeutic target in OS. |
format | Online Article Text |
id | pubmed-10553254 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-105532542023-10-06 RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma Xie, Long Xiao, Weiwei Fang, Hangqi Liu, Guoqiang PLoS One Research Article Receptor activity modifying protein 1 (RAMP1) facilitates the localization of the calcitonin-like receptor (CLR) to the plasma membrane, but its role in osteosarcoma (OS) remains unclear. We evaluated the RAMP1 expression and prognostic value across different cancers, studying tumor immune infiltration. The prognostic value was analyzed using the GSE39058 and TARGET datasets. Differential gene expression was evaluated. a protein-protein interaction network was constructed, and gene set enrichment analysis was performed. The function of RAMP1 in the tumor microenvironment was analyzed, and its expression in OS cell lines was validated using quantitative real-time PCR. High RAMP1 expression correlated with poor prognosis relative to low RAMP1 expression (p < 0.05). Low RAMP1 expression correlated with an abundance of CD4+ memory-activated T cells. whereas a high expression level correlated with a high proportion of gamma-delta T cells (γδ T cells). Differentially expressed genes from TARGET was enriched in olfactory transduction pathways (normalized enrichment scores [NES] = 1.6998, p < 0.0001). RAMP1 expression negatively correlated with CD44 expression but positively correlated with TNFSF9 expression. The RAMP1 gene is substantially expressed in OS cells compared to the normal osteoblast cell line hFOB1.19. Thus, RAMP1 may be a prognostic biomarker and potential therapeutic target in OS. Public Library of Science 2023-10-05 /pmc/articles/PMC10553254/ /pubmed/37796823 http://dx.doi.org/10.1371/journal.pone.0292452 Text en © 2023 Xie et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Xie, Long Xiao, Weiwei Fang, Hangqi Liu, Guoqiang RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title | RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title_full | RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title_fullStr | RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title_full_unstemmed | RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title_short | RAMP1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
title_sort | ramp1 as a novel prognostic biomarker in pan-cancer and osteosarcoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10553254/ https://www.ncbi.nlm.nih.gov/pubmed/37796823 http://dx.doi.org/10.1371/journal.pone.0292452 |
work_keys_str_mv | AT xielong ramp1asanovelprognosticbiomarkerinpancancerandosteosarcoma AT xiaoweiwei ramp1asanovelprognosticbiomarkerinpancancerandosteosarcoma AT fanghangqi ramp1asanovelprognosticbiomarkerinpancancerandosteosarcoma AT liuguoqiang ramp1asanovelprognosticbiomarkerinpancancerandosteosarcoma |