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Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer
European ash, Fraxinus excelsior is facing the double threat of ongoing devastation by the invasive fungal pathogen, Hymenoscyphus fraxineus and the imminent arrival of the non-native emerald ash borer (EAB), Agrilus planipennis. The spread of EAB which is currently moving westwards from European Ru...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556020/ https://www.ncbi.nlm.nih.gov/pubmed/37798274 http://dx.doi.org/10.1038/s41597-023-02588-z |
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author | Doonan, James M. Kosawang, Chatchai Eisenring, Michael Ladd, Tim Roe, Amanda D. Budde, Katharina B. Jørgensen, Hans Jørgen Lyngs Queloz, Valentin Gossner, Martin M. Nielsen, Lene R. |
author_facet | Doonan, James M. Kosawang, Chatchai Eisenring, Michael Ladd, Tim Roe, Amanda D. Budde, Katharina B. Jørgensen, Hans Jørgen Lyngs Queloz, Valentin Gossner, Martin M. Nielsen, Lene R. |
author_sort | Doonan, James M. |
collection | PubMed |
description | European ash, Fraxinus excelsior is facing the double threat of ongoing devastation by the invasive fungal pathogen, Hymenoscyphus fraxineus and the imminent arrival of the non-native emerald ash borer (EAB), Agrilus planipennis. The spread of EAB which is currently moving westwards from European Russia and Ukraine into central Europe, poses an additional substantial threat to European ash, F. excelsior. While the molecular basis for resistance or variation in resistance among European ash genotypes is heavily investigated, comparatively little is known about the molecular ash traits involved in resistance against EAB. In this study we have gathered transcriptomic data from EAB inoculated genotypes of F. excelsior that have previously shown different levels of susceptibility to EAB. Resultant datasets show differential gene expression in susceptible and resistant genotypes in response to EAB infestation. This data will provide important information on the molecular basis of resistance to the EAB and allow the development of management plans to combat a pending threat of a culturally and ecologically important European tree species. |
format | Online Article Text |
id | pubmed-10556020 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-105560202023-10-07 Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer Doonan, James M. Kosawang, Chatchai Eisenring, Michael Ladd, Tim Roe, Amanda D. Budde, Katharina B. Jørgensen, Hans Jørgen Lyngs Queloz, Valentin Gossner, Martin M. Nielsen, Lene R. Sci Data Data Descriptor European ash, Fraxinus excelsior is facing the double threat of ongoing devastation by the invasive fungal pathogen, Hymenoscyphus fraxineus and the imminent arrival of the non-native emerald ash borer (EAB), Agrilus planipennis. The spread of EAB which is currently moving westwards from European Russia and Ukraine into central Europe, poses an additional substantial threat to European ash, F. excelsior. While the molecular basis for resistance or variation in resistance among European ash genotypes is heavily investigated, comparatively little is known about the molecular ash traits involved in resistance against EAB. In this study we have gathered transcriptomic data from EAB inoculated genotypes of F. excelsior that have previously shown different levels of susceptibility to EAB. Resultant datasets show differential gene expression in susceptible and resistant genotypes in response to EAB infestation. This data will provide important information on the molecular basis of resistance to the EAB and allow the development of management plans to combat a pending threat of a culturally and ecologically important European tree species. Nature Publishing Group UK 2023-10-05 /pmc/articles/PMC10556020/ /pubmed/37798274 http://dx.doi.org/10.1038/s41597-023-02588-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Data Descriptor Doonan, James M. Kosawang, Chatchai Eisenring, Michael Ladd, Tim Roe, Amanda D. Budde, Katharina B. Jørgensen, Hans Jørgen Lyngs Queloz, Valentin Gossner, Martin M. Nielsen, Lene R. Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title | Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title_full | Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title_fullStr | Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title_full_unstemmed | Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title_short | Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer |
title_sort | transcriptome profiling of fraxinus excelsior genotypes infested by emerald ash borer |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556020/ https://www.ncbi.nlm.nih.gov/pubmed/37798274 http://dx.doi.org/10.1038/s41597-023-02588-z |
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