Cargando…

Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes

Homologous recombination (HR) is an essential double-stranded DNA break repair pathway. In HR, Rad52 facilitates the formation of Rad51 nucleoprotein filaments on RPA-coated ssDNA. Here, we decipher how Rad52 functions using single-particle cryo-electron microscopy and biophysical approaches. We rep...

Descripción completa

Detalles Bibliográficos
Autores principales: Deveryshetty, Jaigeeth, Chadda, Rahul, Mattice, Jenna R., Karunakaran, Simrithaa, Rau, Michael J., Basore, Katherine, Pokhrel, Nilisha, Englander, Noah, Fitzpatrick, James A. J., Bothner, Brian, Antony, Edwin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556141/
https://www.ncbi.nlm.nih.gov/pubmed/37798272
http://dx.doi.org/10.1038/s41467-023-41993-1
_version_ 1785116815087632384
author Deveryshetty, Jaigeeth
Chadda, Rahul
Mattice, Jenna R.
Karunakaran, Simrithaa
Rau, Michael J.
Basore, Katherine
Pokhrel, Nilisha
Englander, Noah
Fitzpatrick, James A. J.
Bothner, Brian
Antony, Edwin
author_facet Deveryshetty, Jaigeeth
Chadda, Rahul
Mattice, Jenna R.
Karunakaran, Simrithaa
Rau, Michael J.
Basore, Katherine
Pokhrel, Nilisha
Englander, Noah
Fitzpatrick, James A. J.
Bothner, Brian
Antony, Edwin
author_sort Deveryshetty, Jaigeeth
collection PubMed
description Homologous recombination (HR) is an essential double-stranded DNA break repair pathway. In HR, Rad52 facilitates the formation of Rad51 nucleoprotein filaments on RPA-coated ssDNA. Here, we decipher how Rad52 functions using single-particle cryo-electron microscopy and biophysical approaches. We report that Rad52 is a homodecameric ring and each subunit possesses an ordered N-terminal and disordered C-terminal half. An intrinsic structural asymmetry is observed where a few of the C-terminal halves interact with the ordered ring. We describe two conserved charged patches in the C-terminal half that harbor Rad51 and RPA interacting motifs. Interactions between these patches regulate ssDNA binding. Surprisingly, Rad51 interacts with Rad52 at two different bindings sites: one within the positive patch in the disordered C-terminus and the other in the ordered ring. We propose that these features drive Rad51 nucleation onto a single position on the DNA to promote formation of uniform pre-synaptic Rad51 filaments in HR.
format Online
Article
Text
id pubmed-10556141
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-105561412023-10-07 Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes Deveryshetty, Jaigeeth Chadda, Rahul Mattice, Jenna R. Karunakaran, Simrithaa Rau, Michael J. Basore, Katherine Pokhrel, Nilisha Englander, Noah Fitzpatrick, James A. J. Bothner, Brian Antony, Edwin Nat Commun Article Homologous recombination (HR) is an essential double-stranded DNA break repair pathway. In HR, Rad52 facilitates the formation of Rad51 nucleoprotein filaments on RPA-coated ssDNA. Here, we decipher how Rad52 functions using single-particle cryo-electron microscopy and biophysical approaches. We report that Rad52 is a homodecameric ring and each subunit possesses an ordered N-terminal and disordered C-terminal half. An intrinsic structural asymmetry is observed where a few of the C-terminal halves interact with the ordered ring. We describe two conserved charged patches in the C-terminal half that harbor Rad51 and RPA interacting motifs. Interactions between these patches regulate ssDNA binding. Surprisingly, Rad51 interacts with Rad52 at two different bindings sites: one within the positive patch in the disordered C-terminus and the other in the ordered ring. We propose that these features drive Rad51 nucleation onto a single position on the DNA to promote formation of uniform pre-synaptic Rad51 filaments in HR. Nature Publishing Group UK 2023-10-05 /pmc/articles/PMC10556141/ /pubmed/37798272 http://dx.doi.org/10.1038/s41467-023-41993-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Deveryshetty, Jaigeeth
Chadda, Rahul
Mattice, Jenna R.
Karunakaran, Simrithaa
Rau, Michael J.
Basore, Katherine
Pokhrel, Nilisha
Englander, Noah
Fitzpatrick, James A. J.
Bothner, Brian
Antony, Edwin
Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title_full Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title_fullStr Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title_full_unstemmed Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title_short Yeast Rad52 is a homodecamer and possesses BRCA2-like bipartite Rad51 binding modes
title_sort yeast rad52 is a homodecamer and possesses brca2-like bipartite rad51 binding modes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556141/
https://www.ncbi.nlm.nih.gov/pubmed/37798272
http://dx.doi.org/10.1038/s41467-023-41993-1
work_keys_str_mv AT deveryshettyjaigeeth yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT chaddarahul yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT matticejennar yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT karunakaransimrithaa yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT raumichaelj yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT basorekatherine yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT pokhrelnilisha yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT englandernoah yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT fitzpatrickjamesaj yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT bothnerbrian yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes
AT antonyedwin yeastrad52isahomodecamerandpossessesbrca2likebipartiterad51bindingmodes