Cargando…

An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography

Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardi...

Descripción completa

Detalles Bibliográficos
Autores principales: Guo, Ziyu, Zhang, Yuting, Qiu, Zishan, Dong, Suyu, He, Shan, Gao, Huan, Zhang, Jinao, Chen, Yingtao, He, Bingtao, Kong, Zhe, Qiu, Zhaowen, Li, Yan, Li, Caijuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556699/
https://www.ncbi.nlm.nih.gov/pubmed/37808878
http://dx.doi.org/10.3389/fcvm.2023.1266260
_version_ 1785116922645315584
author Guo, Ziyu
Zhang, Yuting
Qiu, Zishan
Dong, Suyu
He, Shan
Gao, Huan
Zhang, Jinao
Chen, Yingtao
He, Bingtao
Kong, Zhe
Qiu, Zhaowen
Li, Yan
Li, Caijuan
author_facet Guo, Ziyu
Zhang, Yuting
Qiu, Zishan
Dong, Suyu
He, Shan
Gao, Huan
Zhang, Jinao
Chen, Yingtao
He, Bingtao
Kong, Zhe
Qiu, Zhaowen
Li, Yan
Li, Caijuan
author_sort Guo, Ziyu
collection PubMed
description Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardiologists to efficiently diagnose cardiac diseases, but this task is challenging due to several reasons, such as: (1) low image contrast, (2) incomplete structures of cardiac, and (3) unclear border between the ventricle and the atrium in some echocardiographic images. In this paper, we applied contrastive learning strategy and proposed a semi-supervised method for echocardiographic images segmentation. This proposed method solved the above challenges effectively and made use of unlabeled data to achieve a great performance, which could help doctors improve the accuracy of CVD diagnosis and screening. We evaluated this method on a public dataset (CAMUS), achieving mean Dice Similarity Coefficient (DSC) of 0.898, 0.911, 0.916 with 1/4, 1/2 and full labeled data on two-chamber (2CH) echocardiography images, and of 0.903, 0.921, 0.928 with 1/4, 1/2 and full labeled data on four-chamber (4CH) echocardiography images. Compared with other existing methods, the proposed method had fewer parameters and better performance. The code and models are available at https://github.com/gpgzy/CL-Cardiac-segmentation.
format Online
Article
Text
id pubmed-10556699
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-105566992023-10-07 An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography Guo, Ziyu Zhang, Yuting Qiu, Zishan Dong, Suyu He, Shan Gao, Huan Zhang, Jinao Chen, Yingtao He, Bingtao Kong, Zhe Qiu, Zhaowen Li, Yan Li, Caijuan Front Cardiovasc Med Cardiovascular Medicine Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardiologists to efficiently diagnose cardiac diseases, but this task is challenging due to several reasons, such as: (1) low image contrast, (2) incomplete structures of cardiac, and (3) unclear border between the ventricle and the atrium in some echocardiographic images. In this paper, we applied contrastive learning strategy and proposed a semi-supervised method for echocardiographic images segmentation. This proposed method solved the above challenges effectively and made use of unlabeled data to achieve a great performance, which could help doctors improve the accuracy of CVD diagnosis and screening. We evaluated this method on a public dataset (CAMUS), achieving mean Dice Similarity Coefficient (DSC) of 0.898, 0.911, 0.916 with 1/4, 1/2 and full labeled data on two-chamber (2CH) echocardiography images, and of 0.903, 0.921, 0.928 with 1/4, 1/2 and full labeled data on four-chamber (4CH) echocardiography images. Compared with other existing methods, the proposed method had fewer parameters and better performance. The code and models are available at https://github.com/gpgzy/CL-Cardiac-segmentation. Frontiers Media S.A. 2023-09-22 /pmc/articles/PMC10556699/ /pubmed/37808878 http://dx.doi.org/10.3389/fcvm.2023.1266260 Text en © 2023 Guo, Zhang, Qiu, Dong, He, Gao, Zhang, Chen, He, Kong, Qiu, Li and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cardiovascular Medicine
Guo, Ziyu
Zhang, Yuting
Qiu, Zishan
Dong, Suyu
He, Shan
Gao, Huan
Zhang, Jinao
Chen, Yingtao
He, Bingtao
Kong, Zhe
Qiu, Zhaowen
Li, Yan
Li, Caijuan
An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title_full An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title_fullStr An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title_full_unstemmed An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title_short An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
title_sort improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
topic Cardiovascular Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556699/
https://www.ncbi.nlm.nih.gov/pubmed/37808878
http://dx.doi.org/10.3389/fcvm.2023.1266260
work_keys_str_mv AT guoziyu animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT zhangyuting animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT qiuzishan animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT dongsuyu animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT heshan animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT gaohuan animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT zhangjinao animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT chenyingtao animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT hebingtao animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT kongzhe animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT qiuzhaowen animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT liyan animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT licaijuan animprovedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT guoziyu improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT zhangyuting improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT qiuzishan improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT dongsuyu improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT heshan improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT gaohuan improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT zhangjinao improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT chenyingtao improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT hebingtao improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT kongzhe improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT qiuzhaowen improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT liyan improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography
AT licaijuan improvedcontrastivelearningnetworkforsemisupervisedmultistructuresegmentationinechocardiography