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An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography
Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardi...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556699/ https://www.ncbi.nlm.nih.gov/pubmed/37808878 http://dx.doi.org/10.3389/fcvm.2023.1266260 |
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author | Guo, Ziyu Zhang, Yuting Qiu, Zishan Dong, Suyu He, Shan Gao, Huan Zhang, Jinao Chen, Yingtao He, Bingtao Kong, Zhe Qiu, Zhaowen Li, Yan Li, Caijuan |
author_facet | Guo, Ziyu Zhang, Yuting Qiu, Zishan Dong, Suyu He, Shan Gao, Huan Zhang, Jinao Chen, Yingtao He, Bingtao Kong, Zhe Qiu, Zhaowen Li, Yan Li, Caijuan |
author_sort | Guo, Ziyu |
collection | PubMed |
description | Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardiologists to efficiently diagnose cardiac diseases, but this task is challenging due to several reasons, such as: (1) low image contrast, (2) incomplete structures of cardiac, and (3) unclear border between the ventricle and the atrium in some echocardiographic images. In this paper, we applied contrastive learning strategy and proposed a semi-supervised method for echocardiographic images segmentation. This proposed method solved the above challenges effectively and made use of unlabeled data to achieve a great performance, which could help doctors improve the accuracy of CVD diagnosis and screening. We evaluated this method on a public dataset (CAMUS), achieving mean Dice Similarity Coefficient (DSC) of 0.898, 0.911, 0.916 with 1/4, 1/2 and full labeled data on two-chamber (2CH) echocardiography images, and of 0.903, 0.921, 0.928 with 1/4, 1/2 and full labeled data on four-chamber (4CH) echocardiography images. Compared with other existing methods, the proposed method had fewer parameters and better performance. The code and models are available at https://github.com/gpgzy/CL-Cardiac-segmentation. |
format | Online Article Text |
id | pubmed-10556699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105566992023-10-07 An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography Guo, Ziyu Zhang, Yuting Qiu, Zishan Dong, Suyu He, Shan Gao, Huan Zhang, Jinao Chen, Yingtao He, Bingtao Kong, Zhe Qiu, Zhaowen Li, Yan Li, Caijuan Front Cardiovasc Med Cardiovascular Medicine Cardiac diseases have high mortality rates and are a significant threat to human health. Echocardiography is a commonly used imaging technique to diagnose cardiac diseases because of its portability, non-invasiveness and low cost. Precise segmentation of basic cardiac structures is crucial for cardiologists to efficiently diagnose cardiac diseases, but this task is challenging due to several reasons, such as: (1) low image contrast, (2) incomplete structures of cardiac, and (3) unclear border between the ventricle and the atrium in some echocardiographic images. In this paper, we applied contrastive learning strategy and proposed a semi-supervised method for echocardiographic images segmentation. This proposed method solved the above challenges effectively and made use of unlabeled data to achieve a great performance, which could help doctors improve the accuracy of CVD diagnosis and screening. We evaluated this method on a public dataset (CAMUS), achieving mean Dice Similarity Coefficient (DSC) of 0.898, 0.911, 0.916 with 1/4, 1/2 and full labeled data on two-chamber (2CH) echocardiography images, and of 0.903, 0.921, 0.928 with 1/4, 1/2 and full labeled data on four-chamber (4CH) echocardiography images. Compared with other existing methods, the proposed method had fewer parameters and better performance. The code and models are available at https://github.com/gpgzy/CL-Cardiac-segmentation. Frontiers Media S.A. 2023-09-22 /pmc/articles/PMC10556699/ /pubmed/37808878 http://dx.doi.org/10.3389/fcvm.2023.1266260 Text en © 2023 Guo, Zhang, Qiu, Dong, He, Gao, Zhang, Chen, He, Kong, Qiu, Li and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cardiovascular Medicine Guo, Ziyu Zhang, Yuting Qiu, Zishan Dong, Suyu He, Shan Gao, Huan Zhang, Jinao Chen, Yingtao He, Bingtao Kong, Zhe Qiu, Zhaowen Li, Yan Li, Caijuan An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title | An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title_full | An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title_fullStr | An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title_full_unstemmed | An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title_short | An improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
title_sort | improved contrastive learning network for semi-supervised multi-structure segmentation in echocardiography |
topic | Cardiovascular Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10556699/ https://www.ncbi.nlm.nih.gov/pubmed/37808878 http://dx.doi.org/10.3389/fcvm.2023.1266260 |
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