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Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint
With the rapid development of science, technology, and engineering, large amounts of data have been generated in many fields in the past 20 years. In the process of medical research, data are constantly generated, and large amounts of real-world data form a “data disaster.” Effective data analysis a...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557005/ https://www.ncbi.nlm.nih.gov/pubmed/37733421 http://dx.doi.org/10.2196/44310 |
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author | Guo, Manping Wang, Yiming Yang, Qiaoning Li, Rui Zhao, Yang Li, Chenfei Zhu, Mingbo Cui, Yao Jiang, Xin Sheng, Song Li, Qingna Gao, Rui |
author_facet | Guo, Manping Wang, Yiming Yang, Qiaoning Li, Rui Zhao, Yang Li, Chenfei Zhu, Mingbo Cui, Yao Jiang, Xin Sheng, Song Li, Qingna Gao, Rui |
author_sort | Guo, Manping |
collection | PubMed |
description | With the rapid development of science, technology, and engineering, large amounts of data have been generated in many fields in the past 20 years. In the process of medical research, data are constantly generated, and large amounts of real-world data form a “data disaster.” Effective data analysis and mining are based on data availability and high data quality. The premise of high data quality is the need to clean the data. Data cleaning is the process of detecting and correcting “dirty data,” which is the basis of data analysis and management. Moreover, data cleaning is a common technology for improving data quality. However, the current literature on real-world research provides little guidance on how to efficiently and ethically set up and perform data cleaning. To address this issue, we proposed a data cleaning framework for real-world research, focusing on the 3 most common types of dirty data (duplicate, missing, and outlier data), and a normal workflow for data cleaning to serve as a reference for the application of such technologies in future studies. We also provided relevant suggestions for common problems in data cleaning. |
format | Online Article Text |
id | pubmed-10557005 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-105570052023-10-07 Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint Guo, Manping Wang, Yiming Yang, Qiaoning Li, Rui Zhao, Yang Li, Chenfei Zhu, Mingbo Cui, Yao Jiang, Xin Sheng, Song Li, Qingna Gao, Rui Interact J Med Res Viewpoint With the rapid development of science, technology, and engineering, large amounts of data have been generated in many fields in the past 20 years. In the process of medical research, data are constantly generated, and large amounts of real-world data form a “data disaster.” Effective data analysis and mining are based on data availability and high data quality. The premise of high data quality is the need to clean the data. Data cleaning is the process of detecting and correcting “dirty data,” which is the basis of data analysis and management. Moreover, data cleaning is a common technology for improving data quality. However, the current literature on real-world research provides little guidance on how to efficiently and ethically set up and perform data cleaning. To address this issue, we proposed a data cleaning framework for real-world research, focusing on the 3 most common types of dirty data (duplicate, missing, and outlier data), and a normal workflow for data cleaning to serve as a reference for the application of such technologies in future studies. We also provided relevant suggestions for common problems in data cleaning. JMIR Publications 2023-09-21 /pmc/articles/PMC10557005/ /pubmed/37733421 http://dx.doi.org/10.2196/44310 Text en ©Manping Guo, Yiming Wang, Qiaoning Yang, Rui Li, Yang Zhao, Chenfei Li, Mingbo Zhu, Yao Cui, Xin Jiang, Song Sheng, Qingna Li, Rui Gao. Originally published in the Interactive Journal of Medical Research (https://www.i-jmr.org/), 21.09.2023. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Interactive Journal of Medical Research, is properly cited. The complete bibliographic information, a link to the original publication on https://www.i-jmr.org/, as well as this copyright and license information must be included. |
spellingShingle | Viewpoint Guo, Manping Wang, Yiming Yang, Qiaoning Li, Rui Zhao, Yang Li, Chenfei Zhu, Mingbo Cui, Yao Jiang, Xin Sheng, Song Li, Qingna Gao, Rui Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title | Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title_full | Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title_fullStr | Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title_full_unstemmed | Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title_short | Normal Workflow and Key Strategies for Data Cleaning Toward Real-World Data: Viewpoint |
title_sort | normal workflow and key strategies for data cleaning toward real-world data: viewpoint |
topic | Viewpoint |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557005/ https://www.ncbi.nlm.nih.gov/pubmed/37733421 http://dx.doi.org/10.2196/44310 |
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