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Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction
BACKGROUND: With the wide application of CT scanning, the separation of pulmonary arteries and veins (A/V) based on CT images plays an important role for assisting surgeons in preoperative planning of lung cancer surgery. However, distinguishing between arteries and veins in chest CT images remains...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557495/ https://www.ncbi.nlm.nih.gov/pubmed/37810355 http://dx.doi.org/10.7717/peerj-cs.1537 |
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author | Pan, Lin Yan, Xiaochao Zheng, Yaoyong Huang, Liqin Zhang, Zhen Fu, Rongda Zheng, Bin Zheng, Shaohua |
author_facet | Pan, Lin Yan, Xiaochao Zheng, Yaoyong Huang, Liqin Zhang, Zhen Fu, Rongda Zheng, Bin Zheng, Shaohua |
author_sort | Pan, Lin |
collection | PubMed |
description | BACKGROUND: With the wide application of CT scanning, the separation of pulmonary arteries and veins (A/V) based on CT images plays an important role for assisting surgeons in preoperative planning of lung cancer surgery. However, distinguishing between arteries and veins in chest CT images remains challenging due to the complex structure and the presence of their similarities. METHODS: We proposed a novel method for automatically separating pulmonary arteries and veins based on vessel topology information and a twin-pipe deep learning network. First, vessel tree topology is constructed by combining scale-space particles and multi-stencils fast marching (MSFM) methods to ensure the continuity and authenticity of the topology. Second, a twin-pipe network is designed to learn the multiscale differences between arteries and veins and the characteristics of the small arteries that closely accompany bronchi. Finally, we designed a topology optimizer that considers interbranch and intrabranch topological relationships to optimize the results of arteries and veins classification. RESULTS: The proposed approach is validated on the public dataset CARVE14 and our private dataset. Compared with ground truth, the proposed method achieves an average accuracy of 90.1% on the CARVE14 dataset, and 96.2% on our local dataset. CONCLUSIONS: The method can effectively separate pulmonary arteries and veins and has good generalization for chest CT images from different devices, as well as enhanced and noncontrast CT image sequences from the same device. |
format | Online Article Text |
id | pubmed-10557495 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105574952023-10-07 Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction Pan, Lin Yan, Xiaochao Zheng, Yaoyong Huang, Liqin Zhang, Zhen Fu, Rongda Zheng, Bin Zheng, Shaohua PeerJ Comput Sci Bioinformatics BACKGROUND: With the wide application of CT scanning, the separation of pulmonary arteries and veins (A/V) based on CT images plays an important role for assisting surgeons in preoperative planning of lung cancer surgery. However, distinguishing between arteries and veins in chest CT images remains challenging due to the complex structure and the presence of their similarities. METHODS: We proposed a novel method for automatically separating pulmonary arteries and veins based on vessel topology information and a twin-pipe deep learning network. First, vessel tree topology is constructed by combining scale-space particles and multi-stencils fast marching (MSFM) methods to ensure the continuity and authenticity of the topology. Second, a twin-pipe network is designed to learn the multiscale differences between arteries and veins and the characteristics of the small arteries that closely accompany bronchi. Finally, we designed a topology optimizer that considers interbranch and intrabranch topological relationships to optimize the results of arteries and veins classification. RESULTS: The proposed approach is validated on the public dataset CARVE14 and our private dataset. Compared with ground truth, the proposed method achieves an average accuracy of 90.1% on the CARVE14 dataset, and 96.2% on our local dataset. CONCLUSIONS: The method can effectively separate pulmonary arteries and veins and has good generalization for chest CT images from different devices, as well as enhanced and noncontrast CT image sequences from the same device. PeerJ Inc. 2023-10-03 /pmc/articles/PMC10557495/ /pubmed/37810355 http://dx.doi.org/10.7717/peerj-cs.1537 Text en © 2023 Pan et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Pan, Lin Yan, Xiaochao Zheng, Yaoyong Huang, Liqin Zhang, Zhen Fu, Rongda Zheng, Bin Zheng, Shaohua Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title | Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title_full | Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title_fullStr | Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title_full_unstemmed | Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title_short | Automatic pulmonary artery-vein separation in CT images using a twin-pipe network and topology reconstruction |
title_sort | automatic pulmonary artery-vein separation in ct images using a twin-pipe network and topology reconstruction |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557495/ https://www.ncbi.nlm.nih.gov/pubmed/37810355 http://dx.doi.org/10.7717/peerj-cs.1537 |
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