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Cell type-specific gene expression dynamics during human brain maturation

The human brain undergoes protracted post-natal maturation, guided by dynamic changes in gene expression. To date, studies exploring these processes have used bulk tissue analyses, which mask cell type-specific gene expression dynamics. Here, using single nucleus (sn)RNA-Sseq on temporal lobe tissue...

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Detalles Bibliográficos
Autores principales: Steyn, Christina, Mishi, Ruvimbo, Fillmore, Stephanie, Verhoog, Matthijs B., More, Jessica, Rohlwink, Ursula K., Melvill, Roger, Butler, James, Enslin, Johannes M. N., Jacobs, Muazzam, Quiñones, Sadi, Dulla, Chris G., Raimondo, Joseph V., Figaji, Anthony, Hockman, Dorit
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557738/
https://www.ncbi.nlm.nih.gov/pubmed/37808657
http://dx.doi.org/10.1101/2023.09.29.560114
Descripción
Sumario:The human brain undergoes protracted post-natal maturation, guided by dynamic changes in gene expression. To date, studies exploring these processes have used bulk tissue analyses, which mask cell type-specific gene expression dynamics. Here, using single nucleus (sn)RNA-Sseq on temporal lobe tissue, including samples of African ancestry, we build a joint paediatric and adult atlas of 54 cell subtypes, which we verify with spatial transcriptomics. We explore the differences in cell states between paediatric and adult cell types, revealing the genes and pathways that change during brain maturation. Our results highlight excitatory neuron subtypes, including the LTK and FREM subtypes, that show elevated expression of genes associated with cognition and synaptic plasticity in paediatric tissue. The new resources we present here improve our understanding of the brain during a critical period of its development and contribute to global efforts to build an inclusive cell map of the brain.