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Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images
Cell shape has long been used to discern cell phenotypes and states, but the underlying premise has not been quantitatively tested. Here, we show that a single cell image can be used to discriminate its migration behavior by analyzing a large number of cell migration data in vitro. We analyzed a lar...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cornell University
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557792/ https://www.ncbi.nlm.nih.gov/pubmed/37808093 |
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author | He, Xiuxiu Chen, Kuangcai Fang, Ning Jiang, Yi |
author_facet | He, Xiuxiu Chen, Kuangcai Fang, Ning Jiang, Yi |
author_sort | He, Xiuxiu |
collection | PubMed |
description | Cell shape has long been used to discern cell phenotypes and states, but the underlying premise has not been quantitatively tested. Here, we show that a single cell image can be used to discriminate its migration behavior by analyzing a large number of cell migration data in vitro. We analyzed a large number of two-dimensional cell migration images over time and found that the cell shape variation space has only six dimensions, and migration behavior can be determined by the coordinates of a single cell image in this 6-dimensional shape-space. We further show that this is possible because persistent cell migration is characterized by spatial-temporally coordinated protrusion and contraction, and a distribution signature in the shape-space. Our findings provide a quantitative underpinning for using cell morphology to differentiate cell dynamical behavior. |
format | Online Article Text |
id | pubmed-10557792 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cornell University |
record_format | MEDLINE/PubMed |
spelling | pubmed-105577922023-10-07 Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images He, Xiuxiu Chen, Kuangcai Fang, Ning Jiang, Yi ArXiv Article Cell shape has long been used to discern cell phenotypes and states, but the underlying premise has not been quantitatively tested. Here, we show that a single cell image can be used to discriminate its migration behavior by analyzing a large number of cell migration data in vitro. We analyzed a large number of two-dimensional cell migration images over time and found that the cell shape variation space has only six dimensions, and migration behavior can be determined by the coordinates of a single cell image in this 6-dimensional shape-space. We further show that this is possible because persistent cell migration is characterized by spatial-temporally coordinated protrusion and contraction, and a distribution signature in the shape-space. Our findings provide a quantitative underpinning for using cell morphology to differentiate cell dynamical behavior. Cornell University 2023-09-28 /pmc/articles/PMC10557792/ /pubmed/37808093 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator. |
spellingShingle | Article He, Xiuxiu Chen, Kuangcai Fang, Ning Jiang, Yi Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title | Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title_full | Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title_fullStr | Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title_full_unstemmed | Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title_short | Coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
title_sort | coordinates in low-dimensional cell shape-space discriminate migration dynamics from single static cell images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10557792/ https://www.ncbi.nlm.nih.gov/pubmed/37808093 |
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