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Population evolution of seagrasses returning to the ocean
Seagrasses are higher flowering plants that live entirely in marine environments, with the greatest habitat variation occurring from land to sea. Genetic structure or population differentiation history is a hot topic in evolutionary biology, which is of great significance for understanding speciatio...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10559988/ https://www.ncbi.nlm.nih.gov/pubmed/37809433 http://dx.doi.org/10.1016/j.heliyon.2023.e20231 |
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author | Yan, Wenjie Wang, Zhaohua Zhou, Bin |
author_facet | Yan, Wenjie Wang, Zhaohua Zhou, Bin |
author_sort | Yan, Wenjie |
collection | PubMed |
description | Seagrasses are higher flowering plants that live entirely in marine environments, with the greatest habitat variation occurring from land to sea. Genetic structure or population differentiation history is a hot topic in evolutionary biology, which is of great significance for understanding speciation. Genetic information is obtained from geographically distributed subpopulations, different subspecies, or strains of the same species using next-generation sequencing techniques. Genetic variation is identified by comparison with reference genomes. Genetic diversity is explored using population structure, principal component analysis (PCA), and phylogenetic relationships. Patterns of population genetic differentiation are elucidated by combining the isolation by distance (IBD) model, linkage disequilibrium levels, and genetic statistical analysis. Demographic history is simulated using effective population size, divergence time, and site frequency spectrum (SFS). Through various population genetic analyses, the genetic structure and historical population dynamics of seagrass can be clarified, and their evolutionary processes can be further explored at the molecular level to understand how evolutionary processes contributed to the formation of early ecological species and provide data support for seagrass conservation. |
format | Online Article Text |
id | pubmed-10559988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-105599882023-10-08 Population evolution of seagrasses returning to the ocean Yan, Wenjie Wang, Zhaohua Zhou, Bin Heliyon Review Article Seagrasses are higher flowering plants that live entirely in marine environments, with the greatest habitat variation occurring from land to sea. Genetic structure or population differentiation history is a hot topic in evolutionary biology, which is of great significance for understanding speciation. Genetic information is obtained from geographically distributed subpopulations, different subspecies, or strains of the same species using next-generation sequencing techniques. Genetic variation is identified by comparison with reference genomes. Genetic diversity is explored using population structure, principal component analysis (PCA), and phylogenetic relationships. Patterns of population genetic differentiation are elucidated by combining the isolation by distance (IBD) model, linkage disequilibrium levels, and genetic statistical analysis. Demographic history is simulated using effective population size, divergence time, and site frequency spectrum (SFS). Through various population genetic analyses, the genetic structure and historical population dynamics of seagrass can be clarified, and their evolutionary processes can be further explored at the molecular level to understand how evolutionary processes contributed to the formation of early ecological species and provide data support for seagrass conservation. Elsevier 2023-09-15 /pmc/articles/PMC10559988/ /pubmed/37809433 http://dx.doi.org/10.1016/j.heliyon.2023.e20231 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Review Article Yan, Wenjie Wang, Zhaohua Zhou, Bin Population evolution of seagrasses returning to the ocean |
title | Population evolution of seagrasses returning to the ocean |
title_full | Population evolution of seagrasses returning to the ocean |
title_fullStr | Population evolution of seagrasses returning to the ocean |
title_full_unstemmed | Population evolution of seagrasses returning to the ocean |
title_short | Population evolution of seagrasses returning to the ocean |
title_sort | population evolution of seagrasses returning to the ocean |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10559988/ https://www.ncbi.nlm.nih.gov/pubmed/37809433 http://dx.doi.org/10.1016/j.heliyon.2023.e20231 |
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