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Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation

Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while...

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Detalles Bibliográficos
Autores principales: Zhang, Fan, Wang, Bo, Lu, Fuhao, Zhang, Xinhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AAAS 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10561978/
https://www.ncbi.nlm.nih.gov/pubmed/37817885
http://dx.doi.org/10.34133/plantphenomics.0106
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author Zhang, Fan
Wang, Bo
Lu, Fuhao
Zhang, Xinhong
author_facet Zhang, Fan
Wang, Bo
Lu, Fuhao
Zhang, Xinhong
author_sort Zhang, Fan
collection PubMed
description Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while the angle of stomata is randomized, so it is not possible to calculate stomata traits directly from the detection anchor boxes. Additional processing of image (e.g., rotating image) is required before detecting stomata and calculating stomata traits. This paper proposes a novel approach, named DeepRSD (deep learning-based rotating stomata detection), for detecting rotating stomata and calculating stomata basic traits at the same time. Simultaneously, the stomata conductance loss function is introduced in the DeepRSD model training, which improves the efficiency of stomata detection and conductance calculation. The experimental results demonstrate that the DeepRSD model reaches 94.3% recognition accuracy for stomata of maize leaf. The proposed method can help researchers conduct large-scale studies on stomata morphology, structure, and stomata conductance models.
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spelling pubmed-105619782023-10-10 Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation Zhang, Fan Wang, Bo Lu, Fuhao Zhang, Xinhong Plant Phenomics Research Article Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while the angle of stomata is randomized, so it is not possible to calculate stomata traits directly from the detection anchor boxes. Additional processing of image (e.g., rotating image) is required before detecting stomata and calculating stomata traits. This paper proposes a novel approach, named DeepRSD (deep learning-based rotating stomata detection), for detecting rotating stomata and calculating stomata basic traits at the same time. Simultaneously, the stomata conductance loss function is introduced in the DeepRSD model training, which improves the efficiency of stomata detection and conductance calculation. The experimental results demonstrate that the DeepRSD model reaches 94.3% recognition accuracy for stomata of maize leaf. The proposed method can help researchers conduct large-scale studies on stomata morphology, structure, and stomata conductance models. AAAS 2023-10-09 /pmc/articles/PMC10561978/ /pubmed/37817885 http://dx.doi.org/10.34133/plantphenomics.0106 Text en Copyright © 2023 Fan Zhang et al. https://creativecommons.org/licenses/by/4.0/Exclusive licensee Nanjing Agricultural University. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY 4.0) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Zhang, Fan
Wang, Bo
Lu, Fuhao
Zhang, Xinhong
Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title_full Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title_fullStr Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title_full_unstemmed Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title_short Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
title_sort rotating stomata measurement based on anchor-free object detection and stomata conductance calculation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10561978/
https://www.ncbi.nlm.nih.gov/pubmed/37817885
http://dx.doi.org/10.34133/plantphenomics.0106
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