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Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation
Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AAAS
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10561978/ https://www.ncbi.nlm.nih.gov/pubmed/37817885 http://dx.doi.org/10.34133/plantphenomics.0106 |
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author | Zhang, Fan Wang, Bo Lu, Fuhao Zhang, Xinhong |
author_facet | Zhang, Fan Wang, Bo Lu, Fuhao Zhang, Xinhong |
author_sort | Zhang, Fan |
collection | PubMed |
description | Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while the angle of stomata is randomized, so it is not possible to calculate stomata traits directly from the detection anchor boxes. Additional processing of image (e.g., rotating image) is required before detecting stomata and calculating stomata traits. This paper proposes a novel approach, named DeepRSD (deep learning-based rotating stomata detection), for detecting rotating stomata and calculating stomata basic traits at the same time. Simultaneously, the stomata conductance loss function is introduced in the DeepRSD model training, which improves the efficiency of stomata detection and conductance calculation. The experimental results demonstrate that the DeepRSD model reaches 94.3% recognition accuracy for stomata of maize leaf. The proposed method can help researchers conduct large-scale studies on stomata morphology, structure, and stomata conductance models. |
format | Online Article Text |
id | pubmed-10561978 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | AAAS |
record_format | MEDLINE/PubMed |
spelling | pubmed-105619782023-10-10 Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation Zhang, Fan Wang, Bo Lu, Fuhao Zhang, Xinhong Plant Phenomics Research Article Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while the angle of stomata is randomized, so it is not possible to calculate stomata traits directly from the detection anchor boxes. Additional processing of image (e.g., rotating image) is required before detecting stomata and calculating stomata traits. This paper proposes a novel approach, named DeepRSD (deep learning-based rotating stomata detection), for detecting rotating stomata and calculating stomata basic traits at the same time. Simultaneously, the stomata conductance loss function is introduced in the DeepRSD model training, which improves the efficiency of stomata detection and conductance calculation. The experimental results demonstrate that the DeepRSD model reaches 94.3% recognition accuracy for stomata of maize leaf. The proposed method can help researchers conduct large-scale studies on stomata morphology, structure, and stomata conductance models. AAAS 2023-10-09 /pmc/articles/PMC10561978/ /pubmed/37817885 http://dx.doi.org/10.34133/plantphenomics.0106 Text en Copyright © 2023 Fan Zhang et al. https://creativecommons.org/licenses/by/4.0/Exclusive licensee Nanjing Agricultural University. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution License 4.0 (CC BY 4.0) (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Article Zhang, Fan Wang, Bo Lu, Fuhao Zhang, Xinhong Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title | Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title_full | Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title_fullStr | Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title_full_unstemmed | Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title_short | Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation |
title_sort | rotating stomata measurement based on anchor-free object detection and stomata conductance calculation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10561978/ https://www.ncbi.nlm.nih.gov/pubmed/37817885 http://dx.doi.org/10.34133/plantphenomics.0106 |
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