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Ligilactobacillus salivarius 2102-15 complete genome sequence data

The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through g...

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Detalles Bibliográficos
Autores principales: Karlyshev, Andrey V., Gould, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10562671/
https://www.ncbi.nlm.nih.gov/pubmed/37823062
http://dx.doi.org/10.1016/j.dib.2023.109564
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author Karlyshev, Andrey V.
Gould, Simon
author_facet Karlyshev, Andrey V.
Gould, Simon
author_sort Karlyshev, Andrey V.
collection PubMed
description The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through genome annotation and by using a BAGEL4 tool. The advantages and limitations of the approaches are highlighted. The data indicate the presence of different types of bacteriocin and immunity protein-encoding genes on both the chromosome and one of the plasmids. The data obtained represents interest to researchers working in the areas related to whole genome sequencing and analysis, as well as being useful for the identification of novel probiotic bacteria and their biomedical applications.
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spelling pubmed-105626712023-10-11 Ligilactobacillus salivarius 2102-15 complete genome sequence data Karlyshev, Andrey V. Gould, Simon Data Brief Data Article The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through genome annotation and by using a BAGEL4 tool. The advantages and limitations of the approaches are highlighted. The data indicate the presence of different types of bacteriocin and immunity protein-encoding genes on both the chromosome and one of the plasmids. The data obtained represents interest to researchers working in the areas related to whole genome sequencing and analysis, as well as being useful for the identification of novel probiotic bacteria and their biomedical applications. Elsevier 2023-09-12 /pmc/articles/PMC10562671/ /pubmed/37823062 http://dx.doi.org/10.1016/j.dib.2023.109564 Text en Crown Copyright © 2023 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Karlyshev, Andrey V.
Gould, Simon
Ligilactobacillus salivarius 2102-15 complete genome sequence data
title Ligilactobacillus salivarius 2102-15 complete genome sequence data
title_full Ligilactobacillus salivarius 2102-15 complete genome sequence data
title_fullStr Ligilactobacillus salivarius 2102-15 complete genome sequence data
title_full_unstemmed Ligilactobacillus salivarius 2102-15 complete genome sequence data
title_short Ligilactobacillus salivarius 2102-15 complete genome sequence data
title_sort ligilactobacillus salivarius 2102-15 complete genome sequence data
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10562671/
https://www.ncbi.nlm.nih.gov/pubmed/37823062
http://dx.doi.org/10.1016/j.dib.2023.109564
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