Cargando…
Ligilactobacillus salivarius 2102-15 complete genome sequence data
The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through g...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10562671/ https://www.ncbi.nlm.nih.gov/pubmed/37823062 http://dx.doi.org/10.1016/j.dib.2023.109564 |
_version_ | 1785118179586998272 |
---|---|
author | Karlyshev, Andrey V. Gould, Simon |
author_facet | Karlyshev, Andrey V. Gould, Simon |
author_sort | Karlyshev, Andrey V. |
collection | PubMed |
description | The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through genome annotation and by using a BAGEL4 tool. The advantages and limitations of the approaches are highlighted. The data indicate the presence of different types of bacteriocin and immunity protein-encoding genes on both the chromosome and one of the plasmids. The data obtained represents interest to researchers working in the areas related to whole genome sequencing and analysis, as well as being useful for the identification of novel probiotic bacteria and their biomedical applications. |
format | Online Article Text |
id | pubmed-10562671 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-105626712023-10-11 Ligilactobacillus salivarius 2102-15 complete genome sequence data Karlyshev, Andrey V. Gould, Simon Data Brief Data Article The article presents Ligilactobacillus salivarius 2102-15 whole genome sequencing data generated by using Illumina and Oxford Nanopore platforms. The genome of the isolate consists of a chromosome and two plasmids. The data on bacteriocin-encoding genes present in the genome were collected through genome annotation and by using a BAGEL4 tool. The advantages and limitations of the approaches are highlighted. The data indicate the presence of different types of bacteriocin and immunity protein-encoding genes on both the chromosome and one of the plasmids. The data obtained represents interest to researchers working in the areas related to whole genome sequencing and analysis, as well as being useful for the identification of novel probiotic bacteria and their biomedical applications. Elsevier 2023-09-12 /pmc/articles/PMC10562671/ /pubmed/37823062 http://dx.doi.org/10.1016/j.dib.2023.109564 Text en Crown Copyright © 2023 Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Karlyshev, Andrey V. Gould, Simon Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title | Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title_full | Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title_fullStr | Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title_full_unstemmed | Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title_short | Ligilactobacillus salivarius 2102-15 complete genome sequence data |
title_sort | ligilactobacillus salivarius 2102-15 complete genome sequence data |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10562671/ https://www.ncbi.nlm.nih.gov/pubmed/37823062 http://dx.doi.org/10.1016/j.dib.2023.109564 |
work_keys_str_mv | AT karlyshevandreyv ligilactobacillussalivarius210215completegenomesequencedata AT gouldsimon ligilactobacillussalivarius210215completegenomesequencedata |