Cargando…

Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata

To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any prepro...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Shuai, Liu, Honggao, Li, Jieqing, Wang, Yuanzhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10563693/
https://www.ncbi.nlm.nih.gov/pubmed/37823161
http://dx.doi.org/10.1002/fsn3.3565
_version_ 1785118388937293824
author Liu, Shuai
Liu, Honggao
Li, Jieqing
Wang, Yuanzhong
author_facet Liu, Shuai
Liu, Honggao
Li, Jieqing
Wang, Yuanzhong
author_sort Liu, Shuai
collection PubMed
description To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any preprocessing, and the spectral data are converted into three‐dimensional spectral images for model building. For large sample studies, the time cost is minimized. In addition, a partial least squares discriminant analysis (PLS‐DA) model and a support vector machine (SVM) model are built for comparison with the deep learning model. The overall effect of the deep learning model is significantly better than that of the traditional chemometric models. The results show that the model achieves 100% accuracy in the training set, test set, and external validation set of the model built after 46 iterations without preprocessing the original spectral data. The sensitivity, specificity, and the effectiveness of the model are all 1. The results concluded that the deep learning model is more effective than the traditional chemometric model and has greater potential for application in the identification of wild and cultivated G. elata.
format Online
Article
Text
id pubmed-10563693
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-105636932023-10-11 Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata Liu, Shuai Liu, Honggao Li, Jieqing Wang, Yuanzhong Food Sci Nutr Original Articles To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any preprocessing, and the spectral data are converted into three‐dimensional spectral images for model building. For large sample studies, the time cost is minimized. In addition, a partial least squares discriminant analysis (PLS‐DA) model and a support vector machine (SVM) model are built for comparison with the deep learning model. The overall effect of the deep learning model is significantly better than that of the traditional chemometric models. The results show that the model achieves 100% accuracy in the training set, test set, and external validation set of the model built after 46 iterations without preprocessing the original spectral data. The sensitivity, specificity, and the effectiveness of the model are all 1. The results concluded that the deep learning model is more effective than the traditional chemometric model and has greater potential for application in the identification of wild and cultivated G. elata. John Wiley and Sons Inc. 2023-07-11 /pmc/articles/PMC10563693/ /pubmed/37823161 http://dx.doi.org/10.1002/fsn3.3565 Text en © 2023 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Liu, Shuai
Liu, Honggao
Li, Jieqing
Wang, Yuanzhong
Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title_full Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title_fullStr Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title_full_unstemmed Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title_short Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
title_sort building deep learning and traditional chemometric models based on fourier transform mid‐infrared spectroscopy: identification of wild and cultivated gastrodia elata
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10563693/
https://www.ncbi.nlm.nih.gov/pubmed/37823161
http://dx.doi.org/10.1002/fsn3.3565
work_keys_str_mv AT liushuai buildingdeeplearningandtraditionalchemometricmodelsbasedonfouriertransformmidinfraredspectroscopyidentificationofwildandcultivatedgastrodiaelata
AT liuhonggao buildingdeeplearningandtraditionalchemometricmodelsbasedonfouriertransformmidinfraredspectroscopyidentificationofwildandcultivatedgastrodiaelata
AT lijieqing buildingdeeplearningandtraditionalchemometricmodelsbasedonfouriertransformmidinfraredspectroscopyidentificationofwildandcultivatedgastrodiaelata
AT wangyuanzhong buildingdeeplearningandtraditionalchemometricmodelsbasedonfouriertransformmidinfraredspectroscopyidentificationofwildandcultivatedgastrodiaelata