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Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any prepro...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10563693/ https://www.ncbi.nlm.nih.gov/pubmed/37823161 http://dx.doi.org/10.1002/fsn3.3565 |
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author | Liu, Shuai Liu, Honggao Li, Jieqing Wang, Yuanzhong |
author_facet | Liu, Shuai Liu, Honggao Li, Jieqing Wang, Yuanzhong |
author_sort | Liu, Shuai |
collection | PubMed |
description | To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any preprocessing, and the spectral data are converted into three‐dimensional spectral images for model building. For large sample studies, the time cost is minimized. In addition, a partial least squares discriminant analysis (PLS‐DA) model and a support vector machine (SVM) model are built for comparison with the deep learning model. The overall effect of the deep learning model is significantly better than that of the traditional chemometric models. The results show that the model achieves 100% accuracy in the training set, test set, and external validation set of the model built after 46 iterations without preprocessing the original spectral data. The sensitivity, specificity, and the effectiveness of the model are all 1. The results concluded that the deep learning model is more effective than the traditional chemometric model and has greater potential for application in the identification of wild and cultivated G. elata. |
format | Online Article Text |
id | pubmed-10563693 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105636932023-10-11 Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata Liu, Shuai Liu, Honggao Li, Jieqing Wang, Yuanzhong Food Sci Nutr Original Articles To identify wild and cultivated Gastrodia elata quickly and accurately, this study is the first to apply three‐dimensional correlation spectroscopy (3DCOS) images combined with deep learning models to the identification of G. elata. The spectral data used for model building do not require any preprocessing, and the spectral data are converted into three‐dimensional spectral images for model building. For large sample studies, the time cost is minimized. In addition, a partial least squares discriminant analysis (PLS‐DA) model and a support vector machine (SVM) model are built for comparison with the deep learning model. The overall effect of the deep learning model is significantly better than that of the traditional chemometric models. The results show that the model achieves 100% accuracy in the training set, test set, and external validation set of the model built after 46 iterations without preprocessing the original spectral data. The sensitivity, specificity, and the effectiveness of the model are all 1. The results concluded that the deep learning model is more effective than the traditional chemometric model and has greater potential for application in the identification of wild and cultivated G. elata. John Wiley and Sons Inc. 2023-07-11 /pmc/articles/PMC10563693/ /pubmed/37823161 http://dx.doi.org/10.1002/fsn3.3565 Text en © 2023 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Liu, Shuai Liu, Honggao Li, Jieqing Wang, Yuanzhong Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata |
title | Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
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title_full | Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
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title_fullStr | Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
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title_full_unstemmed | Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
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title_short | Building deep learning and traditional chemometric models based on Fourier transform mid‐infrared spectroscopy: Identification of wild and cultivated Gastrodia elata
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title_sort | building deep learning and traditional chemometric models based on fourier transform mid‐infrared spectroscopy: identification of wild and cultivated gastrodia elata |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10563693/ https://www.ncbi.nlm.nih.gov/pubmed/37823161 http://dx.doi.org/10.1002/fsn3.3565 |
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