Cargando…
High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz
The NMR spectra of side-chain protons in proteins provide important information, not only about their structure and dynamics, but also about the mechanisms that regulate interactions between macromolecules. However, in the solid-state, these resonances are particularly difficult to resolve, even in...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10566471/ https://www.ncbi.nlm.nih.gov/pubmed/37829013 http://dx.doi.org/10.1039/d3sc03539e |
_version_ | 1785118922661429248 |
---|---|
author | Callon, Morgane Luder, Dominique Malär, Alexander A. Wiegand, Thomas Římal, Václav Lecoq, Lauriane Böckmann, Anja Samoson, Ago Meier, Beat H. |
author_facet | Callon, Morgane Luder, Dominique Malär, Alexander A. Wiegand, Thomas Římal, Václav Lecoq, Lauriane Böckmann, Anja Samoson, Ago Meier, Beat H. |
author_sort | Callon, Morgane |
collection | PubMed |
description | The NMR spectra of side-chain protons in proteins provide important information, not only about their structure and dynamics, but also about the mechanisms that regulate interactions between macromolecules. However, in the solid-state, these resonances are particularly difficult to resolve, even in relatively small proteins. We show that magic-angle-spinning (MAS) frequencies of 160 kHz, combined with a high magnetic field of 1200 MHz proton Larmor frequency, significantly improve their spectral resolution. We investigate in detail the gain for MAS frequencies between 110 and 160 kHz MAS for a model sample as well as for the hepatitis B viral capsid assembled from 120 core-protein (Cp) dimers. For both systems, we found a significantly improved spectral resolution of the side-chain region in the (1)H–(13)C 2D spectra. The combination of 160 kHz MAS frequency with a magnetic field of 1200 MHz, allowed us to assign 61% of the aliphatic protons of Cp. The side-chain proton assignment opens up new possibilities for structural studies and further characterization of protein–protein or protein–nucleic acid interactions. |
format | Online Article Text |
id | pubmed-10566471 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-105664712023-10-12 High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz Callon, Morgane Luder, Dominique Malär, Alexander A. Wiegand, Thomas Římal, Václav Lecoq, Lauriane Böckmann, Anja Samoson, Ago Meier, Beat H. Chem Sci Chemistry The NMR spectra of side-chain protons in proteins provide important information, not only about their structure and dynamics, but also about the mechanisms that regulate interactions between macromolecules. However, in the solid-state, these resonances are particularly difficult to resolve, even in relatively small proteins. We show that magic-angle-spinning (MAS) frequencies of 160 kHz, combined with a high magnetic field of 1200 MHz proton Larmor frequency, significantly improve their spectral resolution. We investigate in detail the gain for MAS frequencies between 110 and 160 kHz MAS for a model sample as well as for the hepatitis B viral capsid assembled from 120 core-protein (Cp) dimers. For both systems, we found a significantly improved spectral resolution of the side-chain region in the (1)H–(13)C 2D spectra. The combination of 160 kHz MAS frequency with a magnetic field of 1200 MHz, allowed us to assign 61% of the aliphatic protons of Cp. The side-chain proton assignment opens up new possibilities for structural studies and further characterization of protein–protein or protein–nucleic acid interactions. The Royal Society of Chemistry 2023-09-20 /pmc/articles/PMC10566471/ /pubmed/37829013 http://dx.doi.org/10.1039/d3sc03539e Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Callon, Morgane Luder, Dominique Malär, Alexander A. Wiegand, Thomas Římal, Václav Lecoq, Lauriane Böckmann, Anja Samoson, Ago Meier, Beat H. High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title | High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title_full | High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title_fullStr | High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title_full_unstemmed | High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title_short | High and fast: NMR protein–proton side-chain assignments at 160 kHz and 1.2 GHz |
title_sort | high and fast: nmr protein–proton side-chain assignments at 160 khz and 1.2 ghz |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10566471/ https://www.ncbi.nlm.nih.gov/pubmed/37829013 http://dx.doi.org/10.1039/d3sc03539e |
work_keys_str_mv | AT callonmorgane highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT luderdominique highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT malaralexandera highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT wiegandthomas highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT rimalvaclav highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT lecoqlauriane highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT bockmannanja highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT samosonago highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz AT meierbeath highandfastnmrproteinprotonsidechainassignmentsat160khzand12ghz |