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Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals
BACKGROUND: It is essential to investigate the prevalence of CYP2C19 alleles that affect drug metabolism. This study measures the allelic and genotypic frequencies of CYP2C19 loss-of-function (LoF) alleles CYP2C19∗2, CYP2C19∗3, and gain-of-function (GoF) alleles CYP2C19∗17 in the general population....
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10568051/ https://www.ncbi.nlm.nih.gov/pubmed/37217095 http://dx.doi.org/10.1016/j.ihj.2023.05.005 |
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author | Yadav, Anshu Kumar Chakkumkollath, Aparna Kodakkat Helna, Aysha Birla, Siddharth Thimmulappa, Rajesh Kumar Shambu, Sunil Kumar Vishwanath, Prashant Prashant, Akila |
author_facet | Yadav, Anshu Kumar Chakkumkollath, Aparna Kodakkat Helna, Aysha Birla, Siddharth Thimmulappa, Rajesh Kumar Shambu, Sunil Kumar Vishwanath, Prashant Prashant, Akila |
author_sort | Yadav, Anshu Kumar |
collection | PubMed |
description | BACKGROUND: It is essential to investigate the prevalence of CYP2C19 alleles that affect drug metabolism. This study measures the allelic and genotypic frequencies of CYP2C19 loss-of-function (LoF) alleles CYP2C19∗2, CYP2C19∗3, and gain-of-function (GoF) alleles CYP2C19∗17 in the general population. METHODOLOGY: The study involved 300 healthy subjects between the ages of 18 and 85 recruited by simple random sampling. Allele-specific touchdown PCR was employed to identify the various alleles. The genotype and allele frequencies were calculated and checked for Hardy–Weinberg equilibrium. The phenotypic prediction of ultra-rapid metabolizer (UM = ∗17/∗17), extensive metabolizer (EM = ∗1/∗17, ∗1/∗1), intermediate metabolizer (IM = ∗1/∗2, ∗1/∗3, ∗2/∗17) and poor metabolizer (PM = ∗2/∗2, ∗2/∗3, ∗3/∗3) was made based on their genotype. RESULTS: The allele frequency of CYP2C19∗2, CYP2C19∗3, and CYP2C19∗17 was 0.365, 0.0033, and 0.18, respectively. The IM phenotype predominated with an overall frequency of 46.67%, including 101 subjects with ∗1/∗2, two subjects with ∗1/∗3, and 37 subjects with ∗2/∗17 genotype. This was followed by EM phenotype with an overall frequency of 35%, including 35 subjects with ∗1/∗17 and 70 subjects with ∗1/∗1 genotype. PM phenotype had an overall frequency of 12.67%, including 38 subjects with ∗2/∗2 genotype, and UM phenotype had an overall frequency of 5.67%, including 17 subjects with ∗17/∗17 genotype. CONCLUSION: Given the high allelic frequency of PM in the study population, a pre-treatment test to identify the individual's genotype may be recommended to decide the dosage, monitor the drug response, and avoid adverse drug reactions. |
format | Online Article Text |
id | pubmed-10568051 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-105680512023-10-13 Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals Yadav, Anshu Kumar Chakkumkollath, Aparna Kodakkat Helna, Aysha Birla, Siddharth Thimmulappa, Rajesh Kumar Shambu, Sunil Kumar Vishwanath, Prashant Prashant, Akila Indian Heart J Original Article BACKGROUND: It is essential to investigate the prevalence of CYP2C19 alleles that affect drug metabolism. This study measures the allelic and genotypic frequencies of CYP2C19 loss-of-function (LoF) alleles CYP2C19∗2, CYP2C19∗3, and gain-of-function (GoF) alleles CYP2C19∗17 in the general population. METHODOLOGY: The study involved 300 healthy subjects between the ages of 18 and 85 recruited by simple random sampling. Allele-specific touchdown PCR was employed to identify the various alleles. The genotype and allele frequencies were calculated and checked for Hardy–Weinberg equilibrium. The phenotypic prediction of ultra-rapid metabolizer (UM = ∗17/∗17), extensive metabolizer (EM = ∗1/∗17, ∗1/∗1), intermediate metabolizer (IM = ∗1/∗2, ∗1/∗3, ∗2/∗17) and poor metabolizer (PM = ∗2/∗2, ∗2/∗3, ∗3/∗3) was made based on their genotype. RESULTS: The allele frequency of CYP2C19∗2, CYP2C19∗3, and CYP2C19∗17 was 0.365, 0.0033, and 0.18, respectively. The IM phenotype predominated with an overall frequency of 46.67%, including 101 subjects with ∗1/∗2, two subjects with ∗1/∗3, and 37 subjects with ∗2/∗17 genotype. This was followed by EM phenotype with an overall frequency of 35%, including 35 subjects with ∗1/∗17 and 70 subjects with ∗1/∗1 genotype. PM phenotype had an overall frequency of 12.67%, including 38 subjects with ∗2/∗2 genotype, and UM phenotype had an overall frequency of 5.67%, including 17 subjects with ∗17/∗17 genotype. CONCLUSION: Given the high allelic frequency of PM in the study population, a pre-treatment test to identify the individual's genotype may be recommended to decide the dosage, monitor the drug response, and avoid adverse drug reactions. Elsevier 2023 2023-05-20 /pmc/articles/PMC10568051/ /pubmed/37217095 http://dx.doi.org/10.1016/j.ihj.2023.05.005 Text en © 2023 Cardiological Society of India. Published by Elsevier, a division of RELX India, Pvt. Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Article Yadav, Anshu Kumar Chakkumkollath, Aparna Kodakkat Helna, Aysha Birla, Siddharth Thimmulappa, Rajesh Kumar Shambu, Sunil Kumar Vishwanath, Prashant Prashant, Akila Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title | Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title_full | Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title_fullStr | Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title_full_unstemmed | Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title_short | Substantiation of a clopidogrel metabolism-associated gene (CYP2C19) variation among healthy individuals |
title_sort | substantiation of a clopidogrel metabolism-associated gene (cyp2c19) variation among healthy individuals |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10568051/ https://www.ncbi.nlm.nih.gov/pubmed/37217095 http://dx.doi.org/10.1016/j.ihj.2023.05.005 |
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