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YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor

INTRODUCTION: Drought stress has become an important factor affecting global food production. Screening and breeding new varieties of peas (Pisum sativum L.) for drought-tolerant is of critical importance to ensure sustainable agricultural production and global food security. Germination rate and ge...

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Autores principales: Jiang, Haoyu, Hu, Fei, Fu, Xiuqing, Chen, Cairong, Wang, Chen, Tian, Luxu, Shi, Yuran
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10568755/
https://www.ncbi.nlm.nih.gov/pubmed/37841608
http://dx.doi.org/10.3389/fpls.2023.1257947
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author Jiang, Haoyu
Hu, Fei
Fu, Xiuqing
Chen, Cairong
Wang, Chen
Tian, Luxu
Shi, Yuran
author_facet Jiang, Haoyu
Hu, Fei
Fu, Xiuqing
Chen, Cairong
Wang, Chen
Tian, Luxu
Shi, Yuran
author_sort Jiang, Haoyu
collection PubMed
description INTRODUCTION: Drought stress has become an important factor affecting global food production. Screening and breeding new varieties of peas (Pisum sativum L.) for drought-tolerant is of critical importance to ensure sustainable agricultural production and global food security. Germination rate and germination index are important indicators of seed germination vigor, and the level of germination vigor of pea seeds directly affects their yield and quality. The traditional manual germination detection can hardly meet the demand of full-time sequence nondestructive detection. We propose YOLOv8-Peas, an improved YOLOv8-n based method for the detection of pea germination vigor. METHODS: We constructed a pea germination dataset and used multiple data augmentation methods to improve the robustness of the model in real-world scenarios. By introducing the C2f-Ghost structure and depth-separable convolution, the model computational complexity is reduced and the model size is compressed. In addition, the original detector head is replaced by the self-designed PDetect detector head, which significantly improves the computational efficiency of the model. The Coordinate Attention (CA) mechanism is added to the backbone network to enhance the model's ability to localize and extract features from critical regions. The neck used a lightweight Content-Aware ReAssembly of FEatures (CARAFE) upsampling operator to capture and retain detailed features at low levels. The Adam optimizer is used to improve the model's learning ability in complex parameter spaces, thus improving the model's detection performance. RESULTS: The experimental results showed that the Params, FLOPs, and Weight Size of YOLOv8-Peas were 1.17M, 3.2G, and 2.7MB, respectively, which decreased by 61.2%, 61%, and 56.5% compared with the original YOLOv8-n. The mAP of YOLOv8-Peas was on par with that of YOLOv8-n, reaching 98.7%, and achieved a detection speed of 116.2FPS. We used PEG6000 to simulate different drought environments and YOLOv8-Peas to analyze and quantify the germination vigor of different genotypes of peas, and screened for the best drought-resistant pea varieties. DISCUSSION: Our model effectively reduces deployment costs, improves detection efficiency, and provides a scientific theoretical basis for drought-resistant genotype screening in pea.
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spelling pubmed-105687552023-10-13 YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor Jiang, Haoyu Hu, Fei Fu, Xiuqing Chen, Cairong Wang, Chen Tian, Luxu Shi, Yuran Front Plant Sci Plant Science INTRODUCTION: Drought stress has become an important factor affecting global food production. Screening and breeding new varieties of peas (Pisum sativum L.) for drought-tolerant is of critical importance to ensure sustainable agricultural production and global food security. Germination rate and germination index are important indicators of seed germination vigor, and the level of germination vigor of pea seeds directly affects their yield and quality. The traditional manual germination detection can hardly meet the demand of full-time sequence nondestructive detection. We propose YOLOv8-Peas, an improved YOLOv8-n based method for the detection of pea germination vigor. METHODS: We constructed a pea germination dataset and used multiple data augmentation methods to improve the robustness of the model in real-world scenarios. By introducing the C2f-Ghost structure and depth-separable convolution, the model computational complexity is reduced and the model size is compressed. In addition, the original detector head is replaced by the self-designed PDetect detector head, which significantly improves the computational efficiency of the model. The Coordinate Attention (CA) mechanism is added to the backbone network to enhance the model's ability to localize and extract features from critical regions. The neck used a lightweight Content-Aware ReAssembly of FEatures (CARAFE) upsampling operator to capture and retain detailed features at low levels. The Adam optimizer is used to improve the model's learning ability in complex parameter spaces, thus improving the model's detection performance. RESULTS: The experimental results showed that the Params, FLOPs, and Weight Size of YOLOv8-Peas were 1.17M, 3.2G, and 2.7MB, respectively, which decreased by 61.2%, 61%, and 56.5% compared with the original YOLOv8-n. The mAP of YOLOv8-Peas was on par with that of YOLOv8-n, reaching 98.7%, and achieved a detection speed of 116.2FPS. We used PEG6000 to simulate different drought environments and YOLOv8-Peas to analyze and quantify the germination vigor of different genotypes of peas, and screened for the best drought-resistant pea varieties. DISCUSSION: Our model effectively reduces deployment costs, improves detection efficiency, and provides a scientific theoretical basis for drought-resistant genotype screening in pea. Frontiers Media S.A. 2023-09-28 /pmc/articles/PMC10568755/ /pubmed/37841608 http://dx.doi.org/10.3389/fpls.2023.1257947 Text en Copyright © 2023 Jiang, Hu, Fu, Chen, Wang, Tian and Shi https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Jiang, Haoyu
Hu, Fei
Fu, Xiuqing
Chen, Cairong
Wang, Chen
Tian, Luxu
Shi, Yuran
YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title_full YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title_fullStr YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title_full_unstemmed YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title_short YOLOv8-Peas: a lightweight drought tolerance method for peas based on seed germination vigor
title_sort yolov8-peas: a lightweight drought tolerance method for peas based on seed germination vigor
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10568755/
https://www.ncbi.nlm.nih.gov/pubmed/37841608
http://dx.doi.org/10.3389/fpls.2023.1257947
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