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cgMSI: pathogen detection within species from nanopore metagenomic sequencing data

BACKGROUND: Metagenomic sequencing is an unbiased approach that can potentially detect all the known and unidentified strains in pathogen detection. Recently, nanopore sequencing has been emerging as a highly potential tool for rapid pathogen detection due to its fast turnaround time. However, ident...

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Detalles Bibliográficos
Autores principales: Zhu, Xu, Zhao, Lili, Huang, Lihong, Yang, Wenxian, Wang, Liansheng, Yu, Rongshan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10568937/
https://www.ncbi.nlm.nih.gov/pubmed/37821827
http://dx.doi.org/10.1186/s12859-023-05512-9

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