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Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
Objective This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods Absorption,...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Thieme Medical and Scientific Publishers Pvt. Ltd.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569850/ https://www.ncbi.nlm.nih.gov/pubmed/36075265 http://dx.doi.org/10.1055/s-0042-1750803 |
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author | Nugraha, Alexander Patera Ardani, I Gusti Aju Wahju Sitalaksmi, Ratri Maya Ramadhani, Nastiti Faradilla Rachmayanti, Desi Kumala, Dina Kharisma, Viol Dhea Rahmadani, Desintya Puspitaningrum, Martining Shoffa Rizqianti, Yuniar Ari, Muhammad Dimas Aditya Nugraha, Albertus Putera Noor, Tengku Natasha Eleena binti Tengku Ahmad Luthfi, Muhammad |
author_facet | Nugraha, Alexander Patera Ardani, I Gusti Aju Wahju Sitalaksmi, Ratri Maya Ramadhani, Nastiti Faradilla Rachmayanti, Desi Kumala, Dina Kharisma, Viol Dhea Rahmadani, Desintya Puspitaningrum, Martining Shoffa Rizqianti, Yuniar Ari, Muhammad Dimas Aditya Nugraha, Albertus Putera Noor, Tengku Natasha Eleena binti Tengku Ahmad Luthfi, Muhammad |
author_sort | Nugraha, Alexander Patera |
collection | PubMed |
description | Objective This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods Absorption, distribution, metabolism, excretion and toxicity prediction, molecular docking simulation, and visualization of chlorogenic acid (CGA) and coumaric acid (CA) as anti-inflammatory, antioxidant, and antibacterial were investigated in silico . Inhibition zone by diffusion method, minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) of RGCBE extract against Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), and Prevotella intermedia (Pi) were done. Statistical Analysis the analysis of variance (ANOVA) difference test, and the post-hoc Tukey's Honest Significant Different (HSD) with a different significance value of p <0.05 Results GCA and CA compounds are good drug molecules and it has low toxicity. Chlorogenic acid have higher binding activity than coumaric acid to tumor necrosis factor (TNF)-α, nuclear factor (NF)-κB, receptor activation NF-κB (RANK) and its ligand (RANKL), interleukin (IL)-6, IL-10, runt related transcription factor (RUNX2), receptor activator nuclear Kappa beta Ligand-osteoprotegrin osteocalcin (RANKL-OPG), osteocalcin, nuclear factor associated T-cell 1 (NFATc1), tartate resistant acid phosphatase (TRAP), peptidoglycan, flagellin, dectin, Hsp70, and Hsp10 protein. RGCB ethanol extract has high antioxidant ability and it has MIC, MBC, and inhibit the growth of Aa, Pg, Fn, and Pi at 50% concentration with significantly different ( p =0.0001 and<0.05). Conclusion RGCB ethanol extract has high antioxidant ability and 50% RGCB ethanol extract may act as strong anti–peri-implantitis bacteria in vitro. In addition, CGA in RGCB potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic in silico . |
format | Online Article Text |
id | pubmed-10569850 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Thieme Medical and Scientific Publishers Pvt. Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105698502023-10-13 Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study Nugraha, Alexander Patera Ardani, I Gusti Aju Wahju Sitalaksmi, Ratri Maya Ramadhani, Nastiti Faradilla Rachmayanti, Desi Kumala, Dina Kharisma, Viol Dhea Rahmadani, Desintya Puspitaningrum, Martining Shoffa Rizqianti, Yuniar Ari, Muhammad Dimas Aditya Nugraha, Albertus Putera Noor, Tengku Natasha Eleena binti Tengku Ahmad Luthfi, Muhammad Eur J Dent Objective This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods Absorption, distribution, metabolism, excretion and toxicity prediction, molecular docking simulation, and visualization of chlorogenic acid (CGA) and coumaric acid (CA) as anti-inflammatory, antioxidant, and antibacterial were investigated in silico . Inhibition zone by diffusion method, minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) of RGCBE extract against Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), and Prevotella intermedia (Pi) were done. Statistical Analysis the analysis of variance (ANOVA) difference test, and the post-hoc Tukey's Honest Significant Different (HSD) with a different significance value of p <0.05 Results GCA and CA compounds are good drug molecules and it has low toxicity. Chlorogenic acid have higher binding activity than coumaric acid to tumor necrosis factor (TNF)-α, nuclear factor (NF)-κB, receptor activation NF-κB (RANK) and its ligand (RANKL), interleukin (IL)-6, IL-10, runt related transcription factor (RUNX2), receptor activator nuclear Kappa beta Ligand-osteoprotegrin osteocalcin (RANKL-OPG), osteocalcin, nuclear factor associated T-cell 1 (NFATc1), tartate resistant acid phosphatase (TRAP), peptidoglycan, flagellin, dectin, Hsp70, and Hsp10 protein. RGCB ethanol extract has high antioxidant ability and it has MIC, MBC, and inhibit the growth of Aa, Pg, Fn, and Pi at 50% concentration with significantly different ( p =0.0001 and<0.05). Conclusion RGCB ethanol extract has high antioxidant ability and 50% RGCB ethanol extract may act as strong anti–peri-implantitis bacteria in vitro. In addition, CGA in RGCB potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic in silico . Thieme Medical and Scientific Publishers Pvt. Ltd. 2022-09-08 /pmc/articles/PMC10569850/ /pubmed/36075265 http://dx.doi.org/10.1055/s-0042-1750803 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution License, permitting unrestricted use, distribution, and reproduction so long as the original work is properly cited. ( https://creativecommons.org/licenses/by/4.0/ ) https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Nugraha, Alexander Patera Ardani, I Gusti Aju Wahju Sitalaksmi, Ratri Maya Ramadhani, Nastiti Faradilla Rachmayanti, Desi Kumala, Dina Kharisma, Viol Dhea Rahmadani, Desintya Puspitaningrum, Martining Shoffa Rizqianti, Yuniar Ari, Muhammad Dimas Aditya Nugraha, Albertus Putera Noor, Tengku Natasha Eleena binti Tengku Ahmad Luthfi, Muhammad Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study |
title |
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (
Coffea Canephora
) Ethanol Extract: An
In Silico
and
In Vitro
Study
|
title_full |
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (
Coffea Canephora
) Ethanol Extract: An
In Silico
and
In Vitro
Study
|
title_fullStr |
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (
Coffea Canephora
) Ethanol Extract: An
In Silico
and
In Vitro
Study
|
title_full_unstemmed |
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (
Coffea Canephora
) Ethanol Extract: An
In Silico
and
In Vitro
Study
|
title_short |
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean (
Coffea Canephora
) Ethanol Extract: An
In Silico
and
In Vitro
Study
|
title_sort | anti–peri-implantitis bacteria's ability of robusta green coffee bean (
coffea canephora
) ethanol extract: an
in silico
and
in vitro
study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569850/ https://www.ncbi.nlm.nih.gov/pubmed/36075265 http://dx.doi.org/10.1055/s-0042-1750803 |
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