Cargando…

Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study

Objective  This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods  Absorption,...

Descripción completa

Detalles Bibliográficos
Autores principales: Nugraha, Alexander Patera, Ardani, I Gusti Aju Wahju, Sitalaksmi, Ratri Maya, Ramadhani, Nastiti Faradilla, Rachmayanti, Desi, Kumala, Dina, Kharisma, Viol Dhea, Rahmadani, Desintya, Puspitaningrum, Martining Shoffa, Rizqianti, Yuniar, Ari, Muhammad Dimas Aditya, Nugraha, Albertus Putera, Noor, Tengku Natasha Eleena binti Tengku Ahmad, Luthfi, Muhammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Thieme Medical and Scientific Publishers Pvt. Ltd. 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569850/
https://www.ncbi.nlm.nih.gov/pubmed/36075265
http://dx.doi.org/10.1055/s-0042-1750803
_version_ 1785119632632315904
author Nugraha, Alexander Patera
Ardani, I Gusti Aju Wahju
Sitalaksmi, Ratri Maya
Ramadhani, Nastiti Faradilla
Rachmayanti, Desi
Kumala, Dina
Kharisma, Viol Dhea
Rahmadani, Desintya
Puspitaningrum, Martining Shoffa
Rizqianti, Yuniar
Ari, Muhammad Dimas Aditya
Nugraha, Albertus Putera
Noor, Tengku Natasha Eleena binti Tengku Ahmad
Luthfi, Muhammad
author_facet Nugraha, Alexander Patera
Ardani, I Gusti Aju Wahju
Sitalaksmi, Ratri Maya
Ramadhani, Nastiti Faradilla
Rachmayanti, Desi
Kumala, Dina
Kharisma, Viol Dhea
Rahmadani, Desintya
Puspitaningrum, Martining Shoffa
Rizqianti, Yuniar
Ari, Muhammad Dimas Aditya
Nugraha, Albertus Putera
Noor, Tengku Natasha Eleena binti Tengku Ahmad
Luthfi, Muhammad
author_sort Nugraha, Alexander Patera
collection PubMed
description Objective  This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods  Absorption, distribution, metabolism, excretion and toxicity prediction, molecular docking simulation, and visualization of chlorogenic acid (CGA) and coumaric acid (CA) as anti-inflammatory, antioxidant, and antibacterial were investigated in silico . Inhibition zone by diffusion method, minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) of RGCBE extract against Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), and Prevotella intermedia (Pi) were done. Statistical Analysis the analysis of variance (ANOVA) difference test, and the post-hoc Tukey's Honest Significant Different (HSD) with a different significance value of p <0.05 Results  GCA and CA compounds are good drug molecules and it has low toxicity. Chlorogenic acid have higher binding activity than coumaric acid to tumor necrosis factor (TNF)-α, nuclear factor (NF)-κB, receptor activation NF-κB (RANK) and its ligand (RANKL), interleukin (IL)-6, IL-10, runt related transcription factor (RUNX2), receptor activator nuclear Kappa beta Ligand-osteoprotegrin osteocalcin (RANKL-OPG), osteocalcin, nuclear factor associated T-cell 1 (NFATc1), tartate resistant acid phosphatase (TRAP), peptidoglycan, flagellin, dectin, Hsp70, and Hsp10 protein. RGCB ethanol extract has high antioxidant ability and it has MIC, MBC, and inhibit the growth of Aa, Pg, Fn, and Pi at 50% concentration with significantly different ( p =0.0001 and<0.05). Conclusion  RGCB ethanol extract has high antioxidant ability and 50% RGCB ethanol extract may act as strong anti–peri-implantitis bacteria in vitro. In addition, CGA in RGCB potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic in silico .
format Online
Article
Text
id pubmed-10569850
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Thieme Medical and Scientific Publishers Pvt. Ltd.
record_format MEDLINE/PubMed
spelling pubmed-105698502023-10-13 Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study Nugraha, Alexander Patera Ardani, I Gusti Aju Wahju Sitalaksmi, Ratri Maya Ramadhani, Nastiti Faradilla Rachmayanti, Desi Kumala, Dina Kharisma, Viol Dhea Rahmadani, Desintya Puspitaningrum, Martining Shoffa Rizqianti, Yuniar Ari, Muhammad Dimas Aditya Nugraha, Albertus Putera Noor, Tengku Natasha Eleena binti Tengku Ahmad Luthfi, Muhammad Eur J Dent Objective  This study was aimed to investigate RGCBE extract as antioxidant and anti–peri-implantitis bacteria through in vitro study and its potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic through in silico study. Materialsand Methods  Absorption, distribution, metabolism, excretion and toxicity prediction, molecular docking simulation, and visualization of chlorogenic acid (CGA) and coumaric acid (CA) as anti-inflammatory, antioxidant, and antibacterial were investigated in silico . Inhibition zone by diffusion method, minimum inhibitory concentration (MIC), and minimum bactericidal concentration (MBC) of RGCBE extract against Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Fusobacterium nucleatum (Fn), and Prevotella intermedia (Pi) were done. Statistical Analysis the analysis of variance (ANOVA) difference test, and the post-hoc Tukey's Honest Significant Different (HSD) with a different significance value of p <0.05 Results  GCA and CA compounds are good drug molecules and it has low toxicity. Chlorogenic acid have higher binding activity than coumaric acid to tumor necrosis factor (TNF)-α, nuclear factor (NF)-κB, receptor activation NF-κB (RANK) and its ligand (RANKL), interleukin (IL)-6, IL-10, runt related transcription factor (RUNX2), receptor activator nuclear Kappa beta Ligand-osteoprotegrin osteocalcin (RANKL-OPG), osteocalcin, nuclear factor associated T-cell 1 (NFATc1), tartate resistant acid phosphatase (TRAP), peptidoglycan, flagellin, dectin, Hsp70, and Hsp10 protein. RGCB ethanol extract has high antioxidant ability and it has MIC, MBC, and inhibit the growth of Aa, Pg, Fn, and Pi at 50% concentration with significantly different ( p =0.0001 and<0.05). Conclusion  RGCB ethanol extract has high antioxidant ability and 50% RGCB ethanol extract may act as strong anti–peri-implantitis bacteria in vitro. In addition, CGA in RGCB potential as antioxidant, antibacterial, anti-inflammatory, antibone resorption, and proosteogenic in silico . Thieme Medical and Scientific Publishers Pvt. Ltd. 2022-09-08 /pmc/articles/PMC10569850/ /pubmed/36075265 http://dx.doi.org/10.1055/s-0042-1750803 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution License, permitting unrestricted use, distribution, and reproduction so long as the original work is properly cited. ( https://creativecommons.org/licenses/by/4.0/ ) https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Nugraha, Alexander Patera
Ardani, I Gusti Aju Wahju
Sitalaksmi, Ratri Maya
Ramadhani, Nastiti Faradilla
Rachmayanti, Desi
Kumala, Dina
Kharisma, Viol Dhea
Rahmadani, Desintya
Puspitaningrum, Martining Shoffa
Rizqianti, Yuniar
Ari, Muhammad Dimas Aditya
Nugraha, Albertus Putera
Noor, Tengku Natasha Eleena binti Tengku Ahmad
Luthfi, Muhammad
Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title_full Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title_fullStr Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title_full_unstemmed Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title_short Anti–Peri-implantitis Bacteria's Ability of Robusta Green Coffee Bean ( Coffea Canephora ) Ethanol Extract: An In Silico and In Vitro Study
title_sort anti–peri-implantitis bacteria's ability of robusta green coffee bean ( coffea canephora ) ethanol extract: an in silico and in vitro study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569850/
https://www.ncbi.nlm.nih.gov/pubmed/36075265
http://dx.doi.org/10.1055/s-0042-1750803
work_keys_str_mv AT nugrahaalexanderpatera antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT ardaniigustiajuwahju antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT sitalaksmiratrimaya antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT ramadhaninastitifaradilla antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT rachmayantidesi antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT kumaladina antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT kharismavioldhea antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT rahmadanidesintya antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT puspitaningrummartiningshoffa antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT rizqiantiyuniar antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT arimuhammaddimasaditya antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT nugrahaalbertusputera antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT noortengkunatashaeleenabintitengkuahmad antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy
AT luthfimuhammad antiperiimplantitisbacteriasabilityofrobustagreencoffeebeancoffeacanephoraethanolextractaninsilicoandinvitrostudy