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Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses

BACKGROUND: Armadillo repeat-containing 10 (ARMC10) is involved in the progression of multiple types of tumors. Pancreatic adenocarcinoma (PAAD) is a lethal disease with poor survival and prognosis. METHODS: We acquired the data of ARMC10 in PAAD patients from the cancer genome atlas (TCGA) and gene...

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Autores principales: Li, Tian-Hao, Qin, Xiao-Han, Wang, Li-Quan, Qin, Cheng, Zhao, Bang-Bo, Cao, Hong-Tao, Yang, Xiao-Ying, Wang, Yuan-Yang, Li, Ze-Ru, Zhou, Xing-Tong, Wang, Wei-Bin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569960/
https://www.ncbi.nlm.nih.gov/pubmed/37842592
http://dx.doi.org/10.1016/j.heliyon.2023.e20464
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author Li, Tian-Hao
Qin, Xiao-Han
Wang, Li-Quan
Qin, Cheng
Zhao, Bang-Bo
Cao, Hong-Tao
Yang, Xiao-Ying
Wang, Yuan-Yang
Li, Ze-Ru
Zhou, Xing-Tong
Wang, Wei-Bin
author_facet Li, Tian-Hao
Qin, Xiao-Han
Wang, Li-Quan
Qin, Cheng
Zhao, Bang-Bo
Cao, Hong-Tao
Yang, Xiao-Ying
Wang, Yuan-Yang
Li, Ze-Ru
Zhou, Xing-Tong
Wang, Wei-Bin
author_sort Li, Tian-Hao
collection PubMed
description BACKGROUND: Armadillo repeat-containing 10 (ARMC10) is involved in the progression of multiple types of tumors. Pancreatic adenocarcinoma (PAAD) is a lethal disease with poor survival and prognosis. METHODS: We acquired the data of ARMC10 in PAAD patients from the cancer genome atlas (TCGA) and gene expression omnibus (GEO) datasets and compared the expression level with normal pancreatic tissues. We evaluated the relevance between ARMC10 expression and clinicopathological factors, immune infiltration degree and prognosis in PAAD. RESULTS: High expression of ARMC10 was relevant to T stage, M stage, pathologic stage, histologic grade, residual tumor, primary therapy outcome (P < 0.05) and related to lower Overall-Survival (OS), Disease-Specific Survival (DSS), and Progression-Free Interval (PFI). Gene set enrichment analysis showed that ARMC10 was related to methylation in neural precursor cells (NPC), G alpha (i) signaling events, APC targets, energy metabolism, potassium channels and IL10 synthesis. The expression level of ARMC10 was positively related to the abundance of T helper cells and negatively to that of plasmacytoid dendritic cells (pDCs). Knocking down of ARMC10 could lead to lower proliferation, invasion, migration ability and colony formation rate of PAAD cells in vitro. CONCLUSIONS: Our research firstly discovered ARMC10 as a novel prognostic biomarker for PAAD patients and played a crucial role in immune regulation in PAAD.
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spelling pubmed-105699602023-10-14 Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses Li, Tian-Hao Qin, Xiao-Han Wang, Li-Quan Qin, Cheng Zhao, Bang-Bo Cao, Hong-Tao Yang, Xiao-Ying Wang, Yuan-Yang Li, Ze-Ru Zhou, Xing-Tong Wang, Wei-Bin Heliyon Research Article BACKGROUND: Armadillo repeat-containing 10 (ARMC10) is involved in the progression of multiple types of tumors. Pancreatic adenocarcinoma (PAAD) is a lethal disease with poor survival and prognosis. METHODS: We acquired the data of ARMC10 in PAAD patients from the cancer genome atlas (TCGA) and gene expression omnibus (GEO) datasets and compared the expression level with normal pancreatic tissues. We evaluated the relevance between ARMC10 expression and clinicopathological factors, immune infiltration degree and prognosis in PAAD. RESULTS: High expression of ARMC10 was relevant to T stage, M stage, pathologic stage, histologic grade, residual tumor, primary therapy outcome (P < 0.05) and related to lower Overall-Survival (OS), Disease-Specific Survival (DSS), and Progression-Free Interval (PFI). Gene set enrichment analysis showed that ARMC10 was related to methylation in neural precursor cells (NPC), G alpha (i) signaling events, APC targets, energy metabolism, potassium channels and IL10 synthesis. The expression level of ARMC10 was positively related to the abundance of T helper cells and negatively to that of plasmacytoid dendritic cells (pDCs). Knocking down of ARMC10 could lead to lower proliferation, invasion, migration ability and colony formation rate of PAAD cells in vitro. CONCLUSIONS: Our research firstly discovered ARMC10 as a novel prognostic biomarker for PAAD patients and played a crucial role in immune regulation in PAAD. Elsevier 2023-09-27 /pmc/articles/PMC10569960/ /pubmed/37842592 http://dx.doi.org/10.1016/j.heliyon.2023.e20464 Text en © 2023 Published by Elsevier Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Li, Tian-Hao
Qin, Xiao-Han
Wang, Li-Quan
Qin, Cheng
Zhao, Bang-Bo
Cao, Hong-Tao
Yang, Xiao-Ying
Wang, Yuan-Yang
Li, Ze-Ru
Zhou, Xing-Tong
Wang, Wei-Bin
Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title_full Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title_fullStr Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title_full_unstemmed Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title_short Prognostic value and immune infiltration of ARMC10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
title_sort prognostic value and immune infiltration of armc10 in pancreatic adenocarcinoma via integrated bioinformatics analyses
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10569960/
https://www.ncbi.nlm.nih.gov/pubmed/37842592
http://dx.doi.org/10.1016/j.heliyon.2023.e20464
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