LinearCoFold and LinearCoPartition: linear-time algorithms for secondary structure prediction of interacting RNA molecules

Many RNAs function through RNA–RNA interactions. Fast and reliable RNA structure prediction with consideration of RNA–RNA interaction is useful, however, existing tools are either too simplistic or too slow. To address this issue, we present LinearCoFold, which approximates the complete minimum free...

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Detalles Bibliográficos
Autores principales: Zhang, He, Li, Sizhen, Dai, Ning, Zhang, Liang, Mathews, David H, Huang, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Methods
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10570024/
https://www.ncbi.nlm.nih.gov/pubmed/37650626
http://dx.doi.org/10.1093/nar/gkad664

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