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A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers

SIMPLE SUMMARY: According to cancer statistics published in 2020, there were 19.3 million new cancer cases and almost 10.0 million cancer deaths worldwide. This suggests that cancer is one of the main health threats worldwide. Survival analysis, combining the exponential distribution with regression...

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Autores principales: Bae, Chul-Young, Kim, Bo-Seon, Jee, Sun-Ha, Lee, Jong-Hoon, Nguyen, Ngoc-Dung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10571885/
https://www.ncbi.nlm.nih.gov/pubmed/37835451
http://dx.doi.org/10.3390/cancers15194757
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author Bae, Chul-Young
Kim, Bo-Seon
Jee, Sun-Ha
Lee, Jong-Hoon
Nguyen, Ngoc-Dung
author_facet Bae, Chul-Young
Kim, Bo-Seon
Jee, Sun-Ha
Lee, Jong-Hoon
Nguyen, Ngoc-Dung
author_sort Bae, Chul-Young
collection PubMed
description SIMPLE SUMMARY: According to cancer statistics published in 2020, there were 19.3 million new cancer cases and almost 10.0 million cancer deaths worldwide. This suggests that cancer is one of the main health threats worldwide. Survival analysis, combining the exponential distribution with regression analysis, can predict the time when a specific event will occur. This nationwide follow-up study aims to present survival deep learning models to assist in the early identification of cancer incidence. Our models consistently achieved high performance in 10 types of cancer. By applying the techniques outlined in this paper, clinical biomarkers, demographic, and anthropometric data can be utilized to predict the risk of cancer occurrence. ABSTRACT: Background: Cancer is one of the main global health threats. Early personalized prediction of cancer incidence is crucial for the population at risk. This study introduces a novel cancer prediction model based on modern recurrent survival deep learning algorithms. Methods: The study includes 160,407 participants from the blood-based cohort of the Korea Cancer Prevention Research-II Biobank, which has been ongoing since 2004. Data linkages were designed to ensure anonymity, and data collection was carried out through nationwide medical examinations. Predictive performance on ten cancer sites, evaluated using the concordance index (c-index), was compared among nDeep and its multitask variation, Cox proportional hazard (PH) regression, DeepSurv, and DeepHit. Results: Our models consistently achieved a c-index of over 0.8 for all ten cancers, with a peak of 0.8922 for lung cancer. They outperformed Cox PH regression and other survival deep neural networks. Conclusion: This study presents a survival deep learning model that demonstrates the highest predictive performance on censored health dataset, to the best of our knowledge. In the future, we plan to investigate the causal relationship between explanatory variables and cancer to reduce cancer incidence and mortality.
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spelling pubmed-105718852023-10-14 A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers Bae, Chul-Young Kim, Bo-Seon Jee, Sun-Ha Lee, Jong-Hoon Nguyen, Ngoc-Dung Cancers (Basel) Article SIMPLE SUMMARY: According to cancer statistics published in 2020, there were 19.3 million new cancer cases and almost 10.0 million cancer deaths worldwide. This suggests that cancer is one of the main health threats worldwide. Survival analysis, combining the exponential distribution with regression analysis, can predict the time when a specific event will occur. This nationwide follow-up study aims to present survival deep learning models to assist in the early identification of cancer incidence. Our models consistently achieved high performance in 10 types of cancer. By applying the techniques outlined in this paper, clinical biomarkers, demographic, and anthropometric data can be utilized to predict the risk of cancer occurrence. ABSTRACT: Background: Cancer is one of the main global health threats. Early personalized prediction of cancer incidence is crucial for the population at risk. This study introduces a novel cancer prediction model based on modern recurrent survival deep learning algorithms. Methods: The study includes 160,407 participants from the blood-based cohort of the Korea Cancer Prevention Research-II Biobank, which has been ongoing since 2004. Data linkages were designed to ensure anonymity, and data collection was carried out through nationwide medical examinations. Predictive performance on ten cancer sites, evaluated using the concordance index (c-index), was compared among nDeep and its multitask variation, Cox proportional hazard (PH) regression, DeepSurv, and DeepHit. Results: Our models consistently achieved a c-index of over 0.8 for all ten cancers, with a peak of 0.8922 for lung cancer. They outperformed Cox PH regression and other survival deep neural networks. Conclusion: This study presents a survival deep learning model that demonstrates the highest predictive performance on censored health dataset, to the best of our knowledge. In the future, we plan to investigate the causal relationship between explanatory variables and cancer to reduce cancer incidence and mortality. MDPI 2023-09-27 /pmc/articles/PMC10571885/ /pubmed/37835451 http://dx.doi.org/10.3390/cancers15194757 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bae, Chul-Young
Kim, Bo-Seon
Jee, Sun-Ha
Lee, Jong-Hoon
Nguyen, Ngoc-Dung
A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title_full A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title_fullStr A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title_full_unstemmed A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title_short A Study on Survival Analysis Methods Using Neural Network to Prevent Cancers
title_sort study on survival analysis methods using neural network to prevent cancers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10571885/
https://www.ncbi.nlm.nih.gov/pubmed/37835451
http://dx.doi.org/10.3390/cancers15194757
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