Cargando…

Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients

X-linked juvenile retinoschisis (XLRS) is an inherited disorder characterized by retinal schisis cavities, which can be observed in optical coherence tomography (OCT) images. Monitoring disease progression necessitates the accurate segmentation and quantification of these cavities; yet, current manu...

Descripción completa

Detalles Bibliográficos
Autores principales: Wei, Xing, Li, Hui, Zhu, Tian, Li, Wuyi, Li, Yamei, Sui, Ruifang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10572414/
https://www.ncbi.nlm.nih.gov/pubmed/37835778
http://dx.doi.org/10.3390/diagnostics13193035
_version_ 1785120229493309440
author Wei, Xing
Li, Hui
Zhu, Tian
Li, Wuyi
Li, Yamei
Sui, Ruifang
author_facet Wei, Xing
Li, Hui
Zhu, Tian
Li, Wuyi
Li, Yamei
Sui, Ruifang
author_sort Wei, Xing
collection PubMed
description X-linked juvenile retinoschisis (XLRS) is an inherited disorder characterized by retinal schisis cavities, which can be observed in optical coherence tomography (OCT) images. Monitoring disease progression necessitates the accurate segmentation and quantification of these cavities; yet, current manual methods are time consuming and result in subjective interpretations, highlighting the need for automated and precise solutions. We employed five state-of-the-art deep learning models—U-Net, U-Net++, Attention U-Net, Residual U-Net, and TransUNet—for the task, leveraging a dataset of 1500 OCT images from 30 patients. To enhance the models’ performance, we utilized data augmentation strategies that were optimized via deep reinforcement learning. The deep learning models achieved a human-equivalent accuracy level in the segmentation of schisis cavities, with U-Net++ surpassing others by attaining an accuracy of 0.9927 and a Dice coefficient of 0.8568. By utilizing reinforcement-learning-based automatic data augmentation, deep learning segmentation models demonstrate a robust and precise method for the automated segmentation of schisis cavities in OCT images. These findings are a promising step toward enhancing clinical evaluation and treatment planning for XLRS.
format Online
Article
Text
id pubmed-10572414
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-105724142023-10-14 Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients Wei, Xing Li, Hui Zhu, Tian Li, Wuyi Li, Yamei Sui, Ruifang Diagnostics (Basel) Article X-linked juvenile retinoschisis (XLRS) is an inherited disorder characterized by retinal schisis cavities, which can be observed in optical coherence tomography (OCT) images. Monitoring disease progression necessitates the accurate segmentation and quantification of these cavities; yet, current manual methods are time consuming and result in subjective interpretations, highlighting the need for automated and precise solutions. We employed five state-of-the-art deep learning models—U-Net, U-Net++, Attention U-Net, Residual U-Net, and TransUNet—for the task, leveraging a dataset of 1500 OCT images from 30 patients. To enhance the models’ performance, we utilized data augmentation strategies that were optimized via deep reinforcement learning. The deep learning models achieved a human-equivalent accuracy level in the segmentation of schisis cavities, with U-Net++ surpassing others by attaining an accuracy of 0.9927 and a Dice coefficient of 0.8568. By utilizing reinforcement-learning-based automatic data augmentation, deep learning segmentation models demonstrate a robust and precise method for the automated segmentation of schisis cavities in OCT images. These findings are a promising step toward enhancing clinical evaluation and treatment planning for XLRS. MDPI 2023-09-24 /pmc/articles/PMC10572414/ /pubmed/37835778 http://dx.doi.org/10.3390/diagnostics13193035 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wei, Xing
Li, Hui
Zhu, Tian
Li, Wuyi
Li, Yamei
Sui, Ruifang
Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title_full Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title_fullStr Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title_full_unstemmed Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title_short Deep Learning with Automatic Data Augmentation for Segmenting Schisis Cavities in the Optical Coherence Tomography Images of X-Linked Juvenile Retinoschisis Patients
title_sort deep learning with automatic data augmentation for segmenting schisis cavities in the optical coherence tomography images of x-linked juvenile retinoschisis patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10572414/
https://www.ncbi.nlm.nih.gov/pubmed/37835778
http://dx.doi.org/10.3390/diagnostics13193035
work_keys_str_mv AT weixing deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients
AT lihui deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients
AT zhutian deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients
AT liwuyi deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients
AT liyamei deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients
AT suiruifang deeplearningwithautomaticdataaugmentationforsegmentingschisiscavitiesintheopticalcoherencetomographyimagesofxlinkedjuvenileretinoschisispatients