Cargando…

CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism

PURPOSE: Albinism is a congenital disorder affecting pigmentation levels, structure, and function of the visual system. The identification of anatomical changes typical for people with albinism (PWA), such as optic chiasm malformations, could become an important component of diagnostics. Here, we te...

Descripción completa

Detalles Bibliográficos
Autores principales: Puzniak, Robert J., Prabhakaran, Gokulraj T., McLean, Rebecca J., Stober, Sebastian, Ather, Sarim, Proudlock, Frank A., Gottlob, Irene, Dineen, Robert A., Hoffmann, Michael B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10573586/
https://www.ncbi.nlm.nih.gov/pubmed/37815506
http://dx.doi.org/10.1167/iovs.64.13.14
_version_ 1785120498734071808
author Puzniak, Robert J.
Prabhakaran, Gokulraj T.
McLean, Rebecca J.
Stober, Sebastian
Ather, Sarim
Proudlock, Frank A.
Gottlob, Irene
Dineen, Robert A.
Hoffmann, Michael B.
author_facet Puzniak, Robert J.
Prabhakaran, Gokulraj T.
McLean, Rebecca J.
Stober, Sebastian
Ather, Sarim
Proudlock, Frank A.
Gottlob, Irene
Dineen, Robert A.
Hoffmann, Michael B.
author_sort Puzniak, Robert J.
collection PubMed
description PURPOSE: Albinism is a congenital disorder affecting pigmentation levels, structure, and function of the visual system. The identification of anatomical changes typical for people with albinism (PWA), such as optic chiasm malformations, could become an important component of diagnostics. Here, we tested an application of convolutional neural networks (CNNs) for this purpose. METHODS: We established and evaluated a CNN, referred to as CHIASM-Net, for the detection of chiasmal malformations from anatomic magnetic resonance (MR) images of the brain. CHIASM-Net, composed of encoding and classification modules, was developed using MR images of controls (n = 1708) and PWA (n = 32). Evaluation involved 8-fold cross validation involving accuracy, precision, recall, and F1-score metrics and was performed on a subset of controls and PWA samples excluded from the training. In addition to quantitative metrics, we used Explainable AI (XAI) methods that granted insights into factors driving the predictions of CHIASM-Net. RESULTS: The results for the scenario indicated an accuracy of 85 ± 14%, precision of 90 ± 14% and recall of 81 ± 18%. XAI methods revealed that the predictions of CHIASM-Net are driven by optic-chiasm white matter and by the optic tracts. CONCLUSIONS: CHIASM-Net was demonstrated to use relevant regions of the optic chiasm for albinism detection from magnetic resonance imaging (MRI) brain anatomies. This indicates the strong potential of CNN-based approaches for visual pathway analysis and ultimately diagnostics.
format Online
Article
Text
id pubmed-10573586
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher The Association for Research in Vision and Ophthalmology
record_format MEDLINE/PubMed
spelling pubmed-105735862023-10-14 CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism Puzniak, Robert J. Prabhakaran, Gokulraj T. McLean, Rebecca J. Stober, Sebastian Ather, Sarim Proudlock, Frank A. Gottlob, Irene Dineen, Robert A. Hoffmann, Michael B. Invest Ophthalmol Vis Sci Visual Neuroscience PURPOSE: Albinism is a congenital disorder affecting pigmentation levels, structure, and function of the visual system. The identification of anatomical changes typical for people with albinism (PWA), such as optic chiasm malformations, could become an important component of diagnostics. Here, we tested an application of convolutional neural networks (CNNs) for this purpose. METHODS: We established and evaluated a CNN, referred to as CHIASM-Net, for the detection of chiasmal malformations from anatomic magnetic resonance (MR) images of the brain. CHIASM-Net, composed of encoding and classification modules, was developed using MR images of controls (n = 1708) and PWA (n = 32). Evaluation involved 8-fold cross validation involving accuracy, precision, recall, and F1-score metrics and was performed on a subset of controls and PWA samples excluded from the training. In addition to quantitative metrics, we used Explainable AI (XAI) methods that granted insights into factors driving the predictions of CHIASM-Net. RESULTS: The results for the scenario indicated an accuracy of 85 ± 14%, precision of 90 ± 14% and recall of 81 ± 18%. XAI methods revealed that the predictions of CHIASM-Net are driven by optic-chiasm white matter and by the optic tracts. CONCLUSIONS: CHIASM-Net was demonstrated to use relevant regions of the optic chiasm for albinism detection from magnetic resonance imaging (MRI) brain anatomies. This indicates the strong potential of CNN-based approaches for visual pathway analysis and ultimately diagnostics. The Association for Research in Vision and Ophthalmology 2023-10-10 /pmc/articles/PMC10573586/ /pubmed/37815506 http://dx.doi.org/10.1167/iovs.64.13.14 Text en Copyright 2023 The Authors https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License.
spellingShingle Visual Neuroscience
Puzniak, Robert J.
Prabhakaran, Gokulraj T.
McLean, Rebecca J.
Stober, Sebastian
Ather, Sarim
Proudlock, Frank A.
Gottlob, Irene
Dineen, Robert A.
Hoffmann, Michael B.
CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title_full CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title_fullStr CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title_full_unstemmed CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title_short CHIASM-Net: Artificial Intelligence-Based Direct Identification of Chiasmal Abnormalities in Albinism
title_sort chiasm-net: artificial intelligence-based direct identification of chiasmal abnormalities in albinism
topic Visual Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10573586/
https://www.ncbi.nlm.nih.gov/pubmed/37815506
http://dx.doi.org/10.1167/iovs.64.13.14
work_keys_str_mv AT puzniakrobertj chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT prabhakarangokulrajt chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT mcleanrebeccaj chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT stobersebastian chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT athersarim chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT proudlockfranka chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT gottlobirene chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT dineenroberta chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism
AT hoffmannmichaelb chiasmnetartificialintelligencebaseddirectidentificationofchiasmalabnormalitiesinalbinism