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Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation

This is the first investigation to perform an unsupervised cluster analysis of activities performed by individuals with lower limb amputation (ILLAs) and individuals without gait impairment, in free-living conditions. Eight individuals with no gait impairments and four ILLAs wore a thigh-based accel...

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Autores principales: Jamieson, Alexander, Murray, Laura, Stankovic, Vladimir, Stankovic, Lina, Buis, Arjan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10575014/
https://www.ncbi.nlm.nih.gov/pubmed/37836994
http://dx.doi.org/10.3390/s23198164
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author Jamieson, Alexander
Murray, Laura
Stankovic, Vladimir
Stankovic, Lina
Buis, Arjan
author_facet Jamieson, Alexander
Murray, Laura
Stankovic, Vladimir
Stankovic, Lina
Buis, Arjan
author_sort Jamieson, Alexander
collection PubMed
description This is the first investigation to perform an unsupervised cluster analysis of activities performed by individuals with lower limb amputation (ILLAs) and individuals without gait impairment, in free-living conditions. Eight individuals with no gait impairments and four ILLAs wore a thigh-based accelerometer and walked on an improvised route across a variety of terrains in the vicinity of their homes. Their physical activity data were clustered to extract ‘unique’ groupings in a low-dimension feature space in an unsupervised learning approach, and an algorithm was created to automatically distinguish such activities. After testing three dimensionality reduction methods—namely, principal component analysis (PCA), t-distributed stochastic neighbor embedding (tSNE), and uniform manifold approximation and projection (UMAP)—we selected tSNE due to its performance and stable outputs. Cluster formation of activities via DBSCAN only occurred after the data were reduced to two dimensions via tSNE and contained only samples for a single individual. Additionally, through analysis of the t-SNE plots, appreciable clusters in walking-based activities were only apparent with ground walking and stair ambulation. Through a combination of density-based clustering and analysis of cluster distance and density, a novel algorithm inspired by the t-SNE plots, resulting in three proposed and validated hypotheses, was able to identify cluster formations that arose from ground walking and stair ambulation. Low dimensional clustering of activities has thus been found feasible when analyzing individual sets of data and can currently recognize stair and ground walking ambulation.
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spelling pubmed-105750142023-10-14 Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation Jamieson, Alexander Murray, Laura Stankovic, Vladimir Stankovic, Lina Buis, Arjan Sensors (Basel) Article This is the first investigation to perform an unsupervised cluster analysis of activities performed by individuals with lower limb amputation (ILLAs) and individuals without gait impairment, in free-living conditions. Eight individuals with no gait impairments and four ILLAs wore a thigh-based accelerometer and walked on an improvised route across a variety of terrains in the vicinity of their homes. Their physical activity data were clustered to extract ‘unique’ groupings in a low-dimension feature space in an unsupervised learning approach, and an algorithm was created to automatically distinguish such activities. After testing three dimensionality reduction methods—namely, principal component analysis (PCA), t-distributed stochastic neighbor embedding (tSNE), and uniform manifold approximation and projection (UMAP)—we selected tSNE due to its performance and stable outputs. Cluster formation of activities via DBSCAN only occurred after the data were reduced to two dimensions via tSNE and contained only samples for a single individual. Additionally, through analysis of the t-SNE plots, appreciable clusters in walking-based activities were only apparent with ground walking and stair ambulation. Through a combination of density-based clustering and analysis of cluster distance and density, a novel algorithm inspired by the t-SNE plots, resulting in three proposed and validated hypotheses, was able to identify cluster formations that arose from ground walking and stair ambulation. Low dimensional clustering of activities has thus been found feasible when analyzing individual sets of data and can currently recognize stair and ground walking ambulation. MDPI 2023-09-29 /pmc/articles/PMC10575014/ /pubmed/37836994 http://dx.doi.org/10.3390/s23198164 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Jamieson, Alexander
Murray, Laura
Stankovic, Vladimir
Stankovic, Lina
Buis, Arjan
Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title_full Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title_fullStr Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title_full_unstemmed Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title_short Unsupervised Cluster Analysis of Walking Activity Data for Healthy Individuals and Individuals with Lower Limb Amputation
title_sort unsupervised cluster analysis of walking activity data for healthy individuals and individuals with lower limb amputation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10575014/
https://www.ncbi.nlm.nih.gov/pubmed/37836994
http://dx.doi.org/10.3390/s23198164
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