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Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)

Sugar Efflux transporters (SWEET) are involved in diverse biological processes of plants. Pathogens have exploited them for nutritional gain and subsequently promote disease progression. Recent studies have implied the involvement of potato SWEET genes in the most devastating late blight disease cau...

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Autores principales: Kardile, Hemant B., Karkute, Suhas Gorakh, Challam, Clarissa, Sharma, Nirmal Kant, Shelake, Rahul Mahadev, Kawar, Prashant Govindrao, Patil, Virupaksh U., Deshmukh, Rupesh, Bhardwaj, Vinay, Chourasia, Kumar Nishant, Valluri, Srikar Duttasai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10575152/
https://www.ncbi.nlm.nih.gov/pubmed/37836173
http://dx.doi.org/10.3390/plants12193433
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author Kardile, Hemant B.
Karkute, Suhas Gorakh
Challam, Clarissa
Sharma, Nirmal Kant
Shelake, Rahul Mahadev
Kawar, Prashant Govindrao
Patil, Virupaksh U.
Deshmukh, Rupesh
Bhardwaj, Vinay
Chourasia, Kumar Nishant
Valluri, Srikar Duttasai
author_facet Kardile, Hemant B.
Karkute, Suhas Gorakh
Challam, Clarissa
Sharma, Nirmal Kant
Shelake, Rahul Mahadev
Kawar, Prashant Govindrao
Patil, Virupaksh U.
Deshmukh, Rupesh
Bhardwaj, Vinay
Chourasia, Kumar Nishant
Valluri, Srikar Duttasai
author_sort Kardile, Hemant B.
collection PubMed
description Sugar Efflux transporters (SWEET) are involved in diverse biological processes of plants. Pathogens have exploited them for nutritional gain and subsequently promote disease progression. Recent studies have implied the involvement of potato SWEET genes in the most devastating late blight disease caused by Phytophthora infestans. Here, we identified and designated 37 putative SWEET genes as StSWEET in potato. We performed detailed in silico analysis, including gene structure, conserved domains, and phylogenetic relationship. Publicly available RNA-seq data was harnessed to retrieve the expression profiles of SWEET genes. The late blight-responsive SWEET genes were identified from the RNA-seq data and then validated using quantitative real-time PCR. The SWEET gene expression was studied along with the biotrophic (SNE1) and necrotrophic (PiNPP1) marker genes of P. infestans. Furthermore, we explored the co-localization of P. infestans resistance loci and SWEET genes. The results indicated that nine transporter genes were responsive to the P. infestans in potato. Among these, six transporters, namely StSWEET10, 12, 18, 27, 29, and 31, showed increased expression after P. infestans inoculation. Interestingly, the observed expression levels aligned with the life cycle of P. infestans, wherein expression of these genes remained upregulated during the biotrophic phase and decreased later on. In contrast, StSWEET13, 14, and 32 didn’t show upregulation in inoculated samples suggesting non-targeting by pathogens. This study underscores these transporters as prime P. infestans targets in potato late blight, pivotal in disease progression, and potential candidates for engineering blight-resistant potato genotypes.
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spelling pubmed-105751522023-10-14 Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.) Kardile, Hemant B. Karkute, Suhas Gorakh Challam, Clarissa Sharma, Nirmal Kant Shelake, Rahul Mahadev Kawar, Prashant Govindrao Patil, Virupaksh U. Deshmukh, Rupesh Bhardwaj, Vinay Chourasia, Kumar Nishant Valluri, Srikar Duttasai Plants (Basel) Article Sugar Efflux transporters (SWEET) are involved in diverse biological processes of plants. Pathogens have exploited them for nutritional gain and subsequently promote disease progression. Recent studies have implied the involvement of potato SWEET genes in the most devastating late blight disease caused by Phytophthora infestans. Here, we identified and designated 37 putative SWEET genes as StSWEET in potato. We performed detailed in silico analysis, including gene structure, conserved domains, and phylogenetic relationship. Publicly available RNA-seq data was harnessed to retrieve the expression profiles of SWEET genes. The late blight-responsive SWEET genes were identified from the RNA-seq data and then validated using quantitative real-time PCR. The SWEET gene expression was studied along with the biotrophic (SNE1) and necrotrophic (PiNPP1) marker genes of P. infestans. Furthermore, we explored the co-localization of P. infestans resistance loci and SWEET genes. The results indicated that nine transporter genes were responsive to the P. infestans in potato. Among these, six transporters, namely StSWEET10, 12, 18, 27, 29, and 31, showed increased expression after P. infestans inoculation. Interestingly, the observed expression levels aligned with the life cycle of P. infestans, wherein expression of these genes remained upregulated during the biotrophic phase and decreased later on. In contrast, StSWEET13, 14, and 32 didn’t show upregulation in inoculated samples suggesting non-targeting by pathogens. This study underscores these transporters as prime P. infestans targets in potato late blight, pivotal in disease progression, and potential candidates for engineering blight-resistant potato genotypes. MDPI 2023-09-29 /pmc/articles/PMC10575152/ /pubmed/37836173 http://dx.doi.org/10.3390/plants12193433 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kardile, Hemant B.
Karkute, Suhas Gorakh
Challam, Clarissa
Sharma, Nirmal Kant
Shelake, Rahul Mahadev
Kawar, Prashant Govindrao
Patil, Virupaksh U.
Deshmukh, Rupesh
Bhardwaj, Vinay
Chourasia, Kumar Nishant
Valluri, Srikar Duttasai
Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title_full Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title_fullStr Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title_full_unstemmed Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title_short Hemibiotrophic Phytophthora infestans Modulates the Expression of SWEET Genes in Potato (Solanum tuberosum L.)
title_sort hemibiotrophic phytophthora infestans modulates the expression of sweet genes in potato (solanum tuberosum l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10575152/
https://www.ncbi.nlm.nih.gov/pubmed/37836173
http://dx.doi.org/10.3390/plants12193433
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