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New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data
BACKGROUND: Growth studies rely on longitudinal measurements, typically represented as trajectories. However, anthropometry is prone to errors that can generate outliers. While various methods are available for detecting outlier measurements, a gold standard has yet to be identified, and there is no...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10576311/ https://www.ncbi.nlm.nih.gov/pubmed/37833647 http://dx.doi.org/10.1186/s12874-023-02045-w |
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author | Massara, Paraskevi Asrar, Arooj Bourdon, Celine Ngari, Moses Keown-Stoneman, Charles D. G. Maguire, Jonathon L. Birken, Catherine S. Berkley, James A. Bandsma, Robert H. J. Comelli, Elena M. |
author_facet | Massara, Paraskevi Asrar, Arooj Bourdon, Celine Ngari, Moses Keown-Stoneman, Charles D. G. Maguire, Jonathon L. Birken, Catherine S. Berkley, James A. Bandsma, Robert H. J. Comelli, Elena M. |
author_sort | Massara, Paraskevi |
collection | PubMed |
description | BACKGROUND: Growth studies rely on longitudinal measurements, typically represented as trajectories. However, anthropometry is prone to errors that can generate outliers. While various methods are available for detecting outlier measurements, a gold standard has yet to be identified, and there is no established method for outlying trajectories. Thus, outlier types and their effects on growth pattern detection still need to be investigated. This work aimed to assess the performance of six methods at detecting different types of outliers, propose two novel methods for outlier trajectory detection and evaluate how outliers affect growth pattern detection. METHODS: We included 393 healthy infants from The Applied Research Group for Kids (TARGet Kids!) cohort and 1651 children with severe malnutrition from the co-trimoxazole prophylaxis clinical trial. We injected outliers of three types and six intensities and applied four outlier detection methods for measurements (model-based and World Health Organization cut-offs-based) and two for trajectories. We also assessed growth pattern detection before and after outlier injection using time series clustering and latent class mixed models. Error type, intensity, and population affected method performance. RESULTS: Model-based outlier detection methods performed best for measurements with precision between 5.72-99.89%, especially for low and moderate error intensities. The clustering-based outlier trajectory method had high precision of 14.93-99.12%. Combining methods improved the detection rate to 21.82% in outlier measurements. Finally, when comparing growth groups with and without outliers, the outliers were shown to alter group membership by 57.9 -79.04%. CONCLUSIONS: World Health Organization cut-off-based techniques were shown to perform well in few very particular cases (extreme errors of high intensity), while model-based techniques performed well, especially for moderate errors of low intensity. Clustering-based outlier trajectory detection performed exceptionally well across all types and intensities of errors, indicating a potential strategic change in how outliers in growth data are viewed. Finally, the importance of detecting outliers was shown, given its impact on children growth studies, as demonstrated by comparing results of growth group detection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-023-02045-w. |
format | Online Article Text |
id | pubmed-10576311 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-105763112023-10-15 New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data Massara, Paraskevi Asrar, Arooj Bourdon, Celine Ngari, Moses Keown-Stoneman, Charles D. G. Maguire, Jonathon L. Birken, Catherine S. Berkley, James A. Bandsma, Robert H. J. Comelli, Elena M. BMC Med Res Methodol Research Article BACKGROUND: Growth studies rely on longitudinal measurements, typically represented as trajectories. However, anthropometry is prone to errors that can generate outliers. While various methods are available for detecting outlier measurements, a gold standard has yet to be identified, and there is no established method for outlying trajectories. Thus, outlier types and their effects on growth pattern detection still need to be investigated. This work aimed to assess the performance of six methods at detecting different types of outliers, propose two novel methods for outlier trajectory detection and evaluate how outliers affect growth pattern detection. METHODS: We included 393 healthy infants from The Applied Research Group for Kids (TARGet Kids!) cohort and 1651 children with severe malnutrition from the co-trimoxazole prophylaxis clinical trial. We injected outliers of three types and six intensities and applied four outlier detection methods for measurements (model-based and World Health Organization cut-offs-based) and two for trajectories. We also assessed growth pattern detection before and after outlier injection using time series clustering and latent class mixed models. Error type, intensity, and population affected method performance. RESULTS: Model-based outlier detection methods performed best for measurements with precision between 5.72-99.89%, especially for low and moderate error intensities. The clustering-based outlier trajectory method had high precision of 14.93-99.12%. Combining methods improved the detection rate to 21.82% in outlier measurements. Finally, when comparing growth groups with and without outliers, the outliers were shown to alter group membership by 57.9 -79.04%. CONCLUSIONS: World Health Organization cut-off-based techniques were shown to perform well in few very particular cases (extreme errors of high intensity), while model-based techniques performed well, especially for moderate errors of low intensity. Clustering-based outlier trajectory detection performed exceptionally well across all types and intensities of errors, indicating a potential strategic change in how outliers in growth data are viewed. Finally, the importance of detecting outliers was shown, given its impact on children growth studies, as demonstrated by comparing results of growth group detection. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12874-023-02045-w. BioMed Central 2023-10-13 /pmc/articles/PMC10576311/ /pubmed/37833647 http://dx.doi.org/10.1186/s12874-023-02045-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Massara, Paraskevi Asrar, Arooj Bourdon, Celine Ngari, Moses Keown-Stoneman, Charles D. G. Maguire, Jonathon L. Birken, Catherine S. Berkley, James A. Bandsma, Robert H. J. Comelli, Elena M. New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title | New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title_full | New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title_fullStr | New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title_full_unstemmed | New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title_short | New approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
title_sort | new approaches and technical considerations in detecting outlier measurements and trajectories in longitudinal children growth data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10576311/ https://www.ncbi.nlm.nih.gov/pubmed/37833647 http://dx.doi.org/10.1186/s12874-023-02045-w |
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