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Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism

The prevalence of obesity and overweight is steadily rising, posing a significant global challenge for humanity. The fundamental cause of obesity and overweight lies in the abnormal accumulation of adipose tissue. While numerous regulatory factors related to fat deposition have been identified in pr...

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Autores principales: Liao, Tianci, Gan, Mailin, Lei, Yuhang, Wang, Yan, Chen, Lei, Shen, Linyuan, Zhu, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10576826/
https://www.ncbi.nlm.nih.gov/pubmed/37838754
http://dx.doi.org/10.1038/s41597-023-02624-y
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author Liao, Tianci
Gan, Mailin
Lei, Yuhang
Wang, Yan
Chen, Lei
Shen, Linyuan
Zhu, Li
author_facet Liao, Tianci
Gan, Mailin
Lei, Yuhang
Wang, Yan
Chen, Lei
Shen, Linyuan
Zhu, Li
author_sort Liao, Tianci
collection PubMed
description The prevalence of obesity and overweight is steadily rising, posing a significant global challenge for humanity. The fundamental cause of obesity and overweight lies in the abnormal accumulation of adipose tissue. While numerous regulatory factors related to fat deposition have been identified in previous studies, a considerable number of regulatory mechanisms remain unknown. tRNA-derived small RNAs (tsRNAs), a novel class of non-coding RNAs, have emerged as significant regulators in various biological processes. In this study, we obtained small RNA sequencing data from subcutaneous white adipose tissue and omental white adipose tissue of lean and obese pigs. In addition, we similarly obtained tsRNAs profiles from scapular brown adipose tissue (BAT), inguinal white adipose tissue (iWAT) and epigonadal white adipose tissue (eWAT) of normal mice. Finally, we successfully identified a large number of expressed tsRNAs in each tissue type and identified tsRNAs conserved in different adipose tissues of pigs and mice. These datasets will be a valuable resource for elucidating the epigenetic mechanisms of fat deposition.
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spelling pubmed-105768262023-10-16 Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism Liao, Tianci Gan, Mailin Lei, Yuhang Wang, Yan Chen, Lei Shen, Linyuan Zhu, Li Sci Data Data Descriptor The prevalence of obesity and overweight is steadily rising, posing a significant global challenge for humanity. The fundamental cause of obesity and overweight lies in the abnormal accumulation of adipose tissue. While numerous regulatory factors related to fat deposition have been identified in previous studies, a considerable number of regulatory mechanisms remain unknown. tRNA-derived small RNAs (tsRNAs), a novel class of non-coding RNAs, have emerged as significant regulators in various biological processes. In this study, we obtained small RNA sequencing data from subcutaneous white adipose tissue and omental white adipose tissue of lean and obese pigs. In addition, we similarly obtained tsRNAs profiles from scapular brown adipose tissue (BAT), inguinal white adipose tissue (iWAT) and epigonadal white adipose tissue (eWAT) of normal mice. Finally, we successfully identified a large number of expressed tsRNAs in each tissue type and identified tsRNAs conserved in different adipose tissues of pigs and mice. These datasets will be a valuable resource for elucidating the epigenetic mechanisms of fat deposition. Nature Publishing Group UK 2023-10-14 /pmc/articles/PMC10576826/ /pubmed/37838754 http://dx.doi.org/10.1038/s41597-023-02624-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Liao, Tianci
Gan, Mailin
Lei, Yuhang
Wang, Yan
Chen, Lei
Shen, Linyuan
Zhu, Li
Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title_full Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title_fullStr Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title_full_unstemmed Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title_short Dynamic changes in the transcriptome of tRNA-derived small RNAs related with fat metabolism
title_sort dynamic changes in the transcriptome of trna-derived small rnas related with fat metabolism
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10576826/
https://www.ncbi.nlm.nih.gov/pubmed/37838754
http://dx.doi.org/10.1038/s41597-023-02624-y
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