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Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications

Polyhydroxyalkanoate (PHA)-producing bacteria represent a powerful synthetic biology chassis for waste bioconversion and bio-upcycling where PHAs can be produced as the final products. In this study, we present a seamless plasmid construction for orthogonal expression of recombinant PET hydrolase (P...

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Autores principales: Minggu, Matthlessa Matthew, Naseron, Nur Anisza Hanoum, Shaberi, Hazlam Shamin Ahmad, Muhammad, Nor Azlan Nor, Baharum, Syarul Nataqain, Ramzi, Ahmad Bazli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577049/
https://www.ncbi.nlm.nih.gov/pubmed/37846354
http://dx.doi.org/10.1016/j.mex.2023.102434
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author Minggu, Matthlessa Matthew
Naseron, Nur Anisza Hanoum
Shaberi, Hazlam Shamin Ahmad
Muhammad, Nor Azlan Nor
Baharum, Syarul Nataqain
Ramzi, Ahmad Bazli
author_facet Minggu, Matthlessa Matthew
Naseron, Nur Anisza Hanoum
Shaberi, Hazlam Shamin Ahmad
Muhammad, Nor Azlan Nor
Baharum, Syarul Nataqain
Ramzi, Ahmad Bazli
author_sort Minggu, Matthlessa Matthew
collection PubMed
description Polyhydroxyalkanoate (PHA)-producing bacteria represent a powerful synthetic biology chassis for waste bioconversion and bio-upcycling where PHAs can be produced as the final products. In this study, we present a seamless plasmid construction for orthogonal expression of recombinant PET hydrolase (PETase) in model PHA-producing bacteria P. putida and C. necator. To this end, this study described seamless cloning and expression methods utilizing SureVector (SV) system for generating pSV-Ortho-PHA (pSVOP) expression platform in bioengineered P. putida and C. necator. Genetic parts specifically Trc promoter, pBBR1 origin of replication, anchoring proteins and signal sequences were utilized for the transformation of pSVOP-based plasmid in electrocompetent cells and orthogonal expression of PETase in both P. putida and C. necator. Validation steps in confirming functional expression of PETase activity in corresponding PETase-expressing strains were also described to demonstrate seamless and detailed methods in establishing bioengineered P. putida and C. necator • Seamless plasmid construction for orthogonal expression in PHA-producing bacteria. • Step-by-step guide for high-efficiency generation of electrotransformants of P. putida and C. necator. • Adaptable methods for rapid strain development (Design, Build, Test and Learn) for whole-cell biocatalysis.
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spelling pubmed-105770492023-10-16 Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications Minggu, Matthlessa Matthew Naseron, Nur Anisza Hanoum Shaberi, Hazlam Shamin Ahmad Muhammad, Nor Azlan Nor Baharum, Syarul Nataqain Ramzi, Ahmad Bazli MethodsX Biochemistry, Genetics and Molecular Biology Polyhydroxyalkanoate (PHA)-producing bacteria represent a powerful synthetic biology chassis for waste bioconversion and bio-upcycling where PHAs can be produced as the final products. In this study, we present a seamless plasmid construction for orthogonal expression of recombinant PET hydrolase (PETase) in model PHA-producing bacteria P. putida and C. necator. To this end, this study described seamless cloning and expression methods utilizing SureVector (SV) system for generating pSV-Ortho-PHA (pSVOP) expression platform in bioengineered P. putida and C. necator. Genetic parts specifically Trc promoter, pBBR1 origin of replication, anchoring proteins and signal sequences were utilized for the transformation of pSVOP-based plasmid in electrocompetent cells and orthogonal expression of PETase in both P. putida and C. necator. Validation steps in confirming functional expression of PETase activity in corresponding PETase-expressing strains were also described to demonstrate seamless and detailed methods in establishing bioengineered P. putida and C. necator • Seamless plasmid construction for orthogonal expression in PHA-producing bacteria. • Step-by-step guide for high-efficiency generation of electrotransformants of P. putida and C. necator. • Adaptable methods for rapid strain development (Design, Build, Test and Learn) for whole-cell biocatalysis. Elsevier 2023-10-11 /pmc/articles/PMC10577049/ /pubmed/37846354 http://dx.doi.org/10.1016/j.mex.2023.102434 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Minggu, Matthlessa Matthew
Naseron, Nur Anisza Hanoum
Shaberi, Hazlam Shamin Ahmad
Muhammad, Nor Azlan Nor
Baharum, Syarul Nataqain
Ramzi, Ahmad Bazli
Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title_full Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title_fullStr Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title_full_unstemmed Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title_short Seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (PHA)-producing bacterial chassis for plastic bio-upcycling applications
title_sort seamless and orthogonal expression of genetic parts in polyhydroxyalkanoate (pha)-producing bacterial chassis for plastic bio-upcycling applications
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577049/
https://www.ncbi.nlm.nih.gov/pubmed/37846354
http://dx.doi.org/10.1016/j.mex.2023.102434
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