Cargando…
Immune-related signature of periodontitis and Alzheimer’s disease linkage
Background: Periodontits (PD) and Alzheimer’s disease (AD) are both associated with ageing and clinical studies increasingly evidence their association. However, specific mechanisms underlying this association remain undeciphered, and immune-related processes are purported to play a signifcant role....
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577303/ https://www.ncbi.nlm.nih.gov/pubmed/37849501 http://dx.doi.org/10.3389/fgene.2023.1230245 |
_version_ | 1785121297222598656 |
---|---|
author | Jin, Jieqi Guang, Mengkai Li, Simin Liu, Yong Zhang, Liwei Zhang, Bo Cheng, Menglin Schmalz, Gerhard Huang, Xiaofeng |
author_facet | Jin, Jieqi Guang, Mengkai Li, Simin Liu, Yong Zhang, Liwei Zhang, Bo Cheng, Menglin Schmalz, Gerhard Huang, Xiaofeng |
author_sort | Jin, Jieqi |
collection | PubMed |
description | Background: Periodontits (PD) and Alzheimer’s disease (AD) are both associated with ageing and clinical studies increasingly evidence their association. However, specific mechanisms underlying this association remain undeciphered, and immune-related processes are purported to play a signifcant role. The accrual of publicly available transcriptomic datasets permits secondary analysis and the application of data-mining and bioinformatic tools for biological discovery. Aim: The present study aimed to leverage publicly available transcriptomic datasets and databases, and apply a series of bioinformatic analysis to identify a robust signature of immune-related signature of PD and AD linkage. Methods: We downloaded gene-expresssion data pertaining PD and AD and identified crosstalk genes. We constructed a protein-protein network analysis, applied immune cell enrichment analysis, and predicted crosstalk immune-related genes and infiltrating immune cells. Next, we applied consisent cluster analysis and performed immune cell bias analysis, followed by LASSO regression to select biomarker immune-related genes. Results: The results showed a 3 gene set comprising of DUSP14, F13A1 and SELE as a robust immune-related signature. Macrophages M2 and NKT, B-cells, CD4(+) memory T-cells and CD8(+) naive T-cells emerged as key immune cells linking PD with AD. Conclusion: Candidate immune-related biomarker genes and immune cells central to the assocation of PD with AD were identified, and merit investigation in experimental and clinical research. |
format | Online Article Text |
id | pubmed-10577303 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-105773032023-10-17 Immune-related signature of periodontitis and Alzheimer’s disease linkage Jin, Jieqi Guang, Mengkai Li, Simin Liu, Yong Zhang, Liwei Zhang, Bo Cheng, Menglin Schmalz, Gerhard Huang, Xiaofeng Front Genet Genetics Background: Periodontits (PD) and Alzheimer’s disease (AD) are both associated with ageing and clinical studies increasingly evidence their association. However, specific mechanisms underlying this association remain undeciphered, and immune-related processes are purported to play a signifcant role. The accrual of publicly available transcriptomic datasets permits secondary analysis and the application of data-mining and bioinformatic tools for biological discovery. Aim: The present study aimed to leverage publicly available transcriptomic datasets and databases, and apply a series of bioinformatic analysis to identify a robust signature of immune-related signature of PD and AD linkage. Methods: We downloaded gene-expresssion data pertaining PD and AD and identified crosstalk genes. We constructed a protein-protein network analysis, applied immune cell enrichment analysis, and predicted crosstalk immune-related genes and infiltrating immune cells. Next, we applied consisent cluster analysis and performed immune cell bias analysis, followed by LASSO regression to select biomarker immune-related genes. Results: The results showed a 3 gene set comprising of DUSP14, F13A1 and SELE as a robust immune-related signature. Macrophages M2 and NKT, B-cells, CD4(+) memory T-cells and CD8(+) naive T-cells emerged as key immune cells linking PD with AD. Conclusion: Candidate immune-related biomarker genes and immune cells central to the assocation of PD with AD were identified, and merit investigation in experimental and clinical research. Frontiers Media S.A. 2023-10-02 /pmc/articles/PMC10577303/ /pubmed/37849501 http://dx.doi.org/10.3389/fgene.2023.1230245 Text en Copyright © 2023 Jin, Guang, Li, Liu, Zhang, Zhang, Cheng, Schmalz and Huang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Jin, Jieqi Guang, Mengkai Li, Simin Liu, Yong Zhang, Liwei Zhang, Bo Cheng, Menglin Schmalz, Gerhard Huang, Xiaofeng Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title | Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title_full | Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title_fullStr | Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title_full_unstemmed | Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title_short | Immune-related signature of periodontitis and Alzheimer’s disease linkage |
title_sort | immune-related signature of periodontitis and alzheimer’s disease linkage |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10577303/ https://www.ncbi.nlm.nih.gov/pubmed/37849501 http://dx.doi.org/10.3389/fgene.2023.1230245 |
work_keys_str_mv | AT jinjieqi immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT guangmengkai immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT lisimin immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT liuyong immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT zhangliwei immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT zhangbo immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT chengmenglin immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT schmalzgerhard immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage AT huangxiaofeng immunerelatedsignatureofperiodontitisandalzheimersdiseaselinkage |